Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.47□□□□□ -2.33
Chd3B1AR17 Gm25138-201ENSMUST00000083248 136 ntBASIC0.47□□□□□ -2.33
Chd3B1AR17 Gm16242-201ENSMUST00000117741 334 ntBASIC0.47□□□□□ -2.33
Chd3B1AR17 Gm26484-201ENSMUST00000158018 106 ntBASIC0.47□□□□□ -2.33
Chd3B1AR17 Gm23542-201ENSMUST00000158208 96 ntBASIC0.47□□□□□ -2.33
Chd3B1AR17 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
Chd3B1AR17 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
Chd3B1AR17 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.47□□□□□ -2.33
Chd3B1AR17 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.47□□□□□ -2.33
Chd3B1AR17 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.47□□□□□ -2.33
Chd3B1AR17 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm16186-201ENSMUST00000120132 216 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm26236-201ENSMUST00000175536 137 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm18588-201ENSMUST00000177308 492 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm16404-201ENSMUST00000177739 468 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm7958-201ENSMUST00000178255 468 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm7950-201ENSMUST00000179633 468 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm14598-201ENSMUST00000180109 468 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm14625-201ENSMUST00000180231 468 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.46□□□□□ -2.34
Chd3B1AR17 Mir362-201ENSMUST00000093592 65 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.46□□□□□ -2.34
Chd3B1AR17 Gm23335-201ENSMUST00000117021 90 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm25054-201ENSMUST00000157370 97 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm18185-201ENSMUST00000186725 667 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm23731-201ENSMUST00000083749 107 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm14536-201ENSMUST00000118324 138 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm15027-201ENSMUST00000120922 138 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm25805-201ENSMUST00000122788 108 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm23016-201ENSMUST00000158431 62 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm17528-201ENSMUST00000171026 239 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Chd3B1AR17 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.45□□□□□ -2.34
Chd3B1AR17 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Chd3B1AR17 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm12433-201ENSMUST00000119659 255 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm42857-201ENSMUST00000200823 339 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm44282-201ENSMUST00000203199 190 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm44921-201ENSMUST00000205290 301 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm20923-201ENSMUST00000190009 319 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm21088-201ENSMUST00000190875 316 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm44326-201ENSMUST00000198226 101 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.44□□□□□ -2.34
Chd3B1AR17 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm9795-201ENSMUST00000062156 693 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm22302-201ENSMUST00000082657 106 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm24523-201ENSMUST00000083965 132 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm25207-201ENSMUST00000093745 107 ntBASIC0.44□□□□□ -2.34
Chd3B1AR17 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Chd3B1AR17 Mir3079-201ENSMUST00000175428 90 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 Gm26335-201ENSMUST00000178449 107 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 Gm27545-201ENSMUST00000184755 202 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 Gm29022-201ENSMUST00000190702 225 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 Gm44726-201ENSMUST00000203427 217 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 Gm45704-201ENSMUST00000212582 403 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 Gm24527-201ENSMUST00000082920 107 ntBASIC0.43□□□□□ -2.34
Chd3B1AR17 Gm24385-201ENSMUST00000122694 350 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm22215-201ENSMUST00000157558 96 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm25750-201ENSMUST00000175483 112 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm24038-201ENSMUST00000082872 159 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm24616-201ENSMUST00000083274 139 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm23097-201ENSMUST00000083448 105 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm14293-201ENSMUST00000118528 577 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm25949-201ENSMUST00000175333 114 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm24487-201ENSMUST00000178017 63 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm37918-201ENSMUST00000192071 120 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm25789-201ENSMUST00000083294 76 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.42□□□□□ -2.34
Chd3B1AR17 Gm12143-201ENSMUST00000119666 332 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 Gm24393-201ENSMUST00000158135 97 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 Gm26314-201ENSMUST00000083891 107 ntBASIC0.41□□□□□ -2.34
Chd3B1AR17 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms