Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm26224-201ENSMUST00000082506 80 ntBASIC0.84□□□□□ -2.27
Scn3aA2ASI5 Gm22704-201ENSMUST00000083027 137 ntBASIC0.84□□□□□ -2.27
Scn3aA2ASI5 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
Scn3aA2ASI5 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm14574-201ENSMUST00000120644 279 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm25781-201ENSMUST00000122527 84 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Scn3aA2ASI5 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm26339-201ENSMUST00000102368 99 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm9059-201ENSMUST00000118319 183 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm26255-201ENSMUST00000122492 103 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm23982-201ENSMUST00000157141 106 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm24504-201ENSMUST00000157679 100 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm25450-201ENSMUST00000179144 107 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm28408-201ENSMUST00000191557 463 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.83□□□□□ -2.28
Scn3aA2ASI5 Gm14922-201ENSMUST00000121131 163 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Gm16265-201ENSMUST00000134558 108 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Gm23542-201ENSMUST00000158208 96 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Mir3109-201ENSMUST00000175301 88 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Gm27540-201ENSMUST00000184950 187 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Gm37313-201ENSMUST00000191673 290 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Gm37763-201ENSMUST00000193445 120 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Gm42533-201ENSMUST00000196247 157 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.82□□□□□ -2.28
Scn3aA2ASI5 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Mir32-201ENSMUST00000083610 70 ntBASIC0.82□□□□□ -2.28
Scn3aA2ASI5 Gm11856-201ENSMUST00000118712 276 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm22085-201ENSMUST00000158344 110 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm22403-201ENSMUST00000174919 84 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Mir6419-201ENSMUST00000184784 113 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm7654-201ENSMUST00000186738 683 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm29229-201ENSMUST00000188874 323 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm28992-201ENSMUST00000190534 139 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm37693-201ENSMUST00000194562 234 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm38109-201ENSMUST00000195386 181 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm44490-201ENSMUST00000198566 127 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm23991-201ENSMUST00000117033 93 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm25827-201ENSMUST00000157089 107 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm23474-201ENSMUST00000158884 75 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm20386-201ENSMUST00000174010 132 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Mir7093-201ENSMUST00000184195 101 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Gm23735-201ENSMUST00000082551 134 ntBASIC0.81□□□□□ -2.28
Scn3aA2ASI5 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Scn3aA2ASI5 Gm11834-201ENSMUST00000122257 585 ntBASIC0.8□□□□□ -2.28
Scn3aA2ASI5 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.8□□□□□ -2.28
Scn3aA2ASI5 Gm22945-201ENSMUST00000158557 157 ntBASIC0.8□□□□□ -2.28
Scn3aA2ASI5 Mir3061-201ENSMUST00000175129 91 ntBASIC0.8□□□□□ -2.28
Scn3aA2ASI5 Gm43035-201ENSMUST00000197626 517 ntBASIC0.8□□□□□ -2.28
Scn3aA2ASI5 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.8□□□□□ -2.28
Scn3aA2ASI5 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.8□□□□□ -2.28
Scn3aA2ASI5 Gm25793-201ENSMUST00000083287 107 ntBASIC0.8□□□□□ -2.28
Scn3aA2ASI5 Gm12449-201ENSMUST00000117572 234 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm24192-201ENSMUST00000157978 145 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm23759-201ENSMUST00000158351 268 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm26194-201ENSMUST00000175036 71 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm28912-201ENSMUST00000189001 234 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Mir155-201ENSMUST00000083463 65 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm26074-201ENSMUST00000104063 129 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm23779-201ENSMUST00000157938 64 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm26213-201ENSMUST00000158582 110 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Gm38060-201ENSMUST00000194822 464 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Rny1-201ENSMUST00000083767 112 ntBASIC0.79□□□□□ -2.28
Scn3aA2ASI5 Mir767-201ENSMUST00000103256 107 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Gm23907-201ENSMUST00000104595 189 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Gm14296-202ENSMUST00000108931 750 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Gm7958-201ENSMUST00000178255 468 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Gm7950-201ENSMUST00000179633 468 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Gm27997-201ENSMUST00000184942 69 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.78□□□□□ -2.28
Scn3aA2ASI5 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 185.4 ms