Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm20391-201ENSMUST00000174722 106 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23967-201ENSMUST00000175062 78 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm22914-201ENSMUST00000175195 77 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm36956-201ENSMUST00000193830 214 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm44465-201ENSMUST00000199536 114 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23614-201ENSMUST00000082598 107 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm25636-201ENSMUST00000082666 133 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm22294-201ENSMUST00000083308 104 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm24116-201ENSMUST00000103975 107 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm24440-201ENSMUST00000157236 63 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm24512-201ENSMUST00000174963 65 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm44976-201ENSMUST00000205543 261 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25930-201ENSMUST00000082785 107 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25204-201ENSMUST00000082843 106 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Mir496a-201ENSMUST00000093627 79 ntBASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23766-201ENSMUST00000103894 80 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm22796-201ENSMUST00000157234 106 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Mir1961-201ENSMUST00000158643 112 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23059-201ENSMUST00000158978 107 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm24810-201ENSMUST00000175317 70 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23355-201ENSMUST00000177614 107 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm16404-201ENSMUST00000177739 468 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm14598-201ENSMUST00000180109 468 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm14625-201ENSMUST00000180231 468 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23148-201ENSMUST00000180367 107 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm37337-201ENSMUST00000192601 993 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Mir7661-201ENSMUST00000197023 61 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm43884-201ENSMUST00000204251 559 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm18188-201ENSMUST00000219386 478 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23625-201ENSMUST00000082457 100 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25258-201ENSMUST00000083049 107 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm26329-201ENSMUST00000093723 110 ntBASIC0.45□□□□□ -2.34
Trav11A0A0B4J1J9 Gm24579-201ENSMUST00000103964 144 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm26082-201ENSMUST00000104070 127 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Mir1951-201ENSMUST00000157981 89 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm22888-201ENSMUST00000158640 77 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Mir3079-201ENSMUST00000175428 90 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Mir1954-201ENSMUST00000175595 86 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm20923-201ENSMUST00000190009 319 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm21088-201ENSMUST00000190875 316 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Mir468-201ENSMUST00000197332 78 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Mir101a-201ENSMUST00000083517 83 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23851-201ENSMUST00000083831 103 ntBASIC0.44□□□□□ -2.34
Trav11A0A0B4J1J9 Gm12432-201ENSMUST00000119540 186 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Gm22791-201ENSMUST00000157232 145 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Gm26022-201ENSMUST00000158663 108 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Gm26400-201ENSMUST00000175012 85 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Gm27894-201ENSMUST00000184177 92 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Gm24042-201ENSMUST00000083114 103 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.43□□□□□ -2.34
Trav11A0A0B4J1J9 Mir880-201ENSMUST00000104809 78 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm14536-201ENSMUST00000118324 138 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm15027-201ENSMUST00000120922 138 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23759-201ENSMUST00000158351 268 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23022-201ENSMUST00000158768 180 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25643-201ENSMUST00000158874 103 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25949-201ENSMUST00000175333 114 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm22248-201ENSMUST00000082482 150 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Gm22809-201ENSMUST00000082743 156 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Mir196b-201ENSMUST00000083509 85 ntBASIC0.42□□□□□ -2.34
Trav11A0A0B4J1J9 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Mir654-201ENSMUST00000104787 84 ntBASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Gm22985-201ENSMUST00000122754 116 ntBASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Gm23760-201ENSMUST00000158350 116 ntBASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25715-201ENSMUST00000158627 125 ntBASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25838-201ENSMUST00000158920 120 ntBASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Gm25450-201ENSMUST00000179144 107 ntBASIC0.41□□□□□ -2.34
Trav11A0A0B4J1J9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms