Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Snord70-201ENSMUST00000104157 87 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Gm23836-201ENSMUST00000104434 129 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Gm23854-201ENSMUST00000158378 108 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Gm24358-201ENSMUST00000158424 288 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Gm22433-201ENSMUST00000158550 142 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Gm23548-201ENSMUST00000158963 106 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Gm17113-201ENSMUST00000170118 171 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Mir3961-201ENSMUST00000198795 59 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Gm45344-201ENSMUST00000211610 341 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.57□□□□□ -2.16
H2afb1S4R1E0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Gm26342-201ENSMUST00000104557 129 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Mir1951-201ENSMUST00000157981 89 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Gm23852-201ENSMUST00000158376 77 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Gm25718-201ENSMUST00000158632 118 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Gm20477-201ENSMUST00000174028 280 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Mir3092-201ENSMUST00000174954 96 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Mir3086-201ENSMUST00000175072 87 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.56□□□□□ -2.16
H2afb1S4R1E0 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Rny1-201ENSMUST00000083767 112 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Gm25513-201ENSMUST00000083861 162 ntBASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
H2afb1S4R1E0 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Gm26135-201ENSMUST00000101993 72 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Gm12686-201ENSMUST00000120546 397 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Gm15214-201ENSMUST00000122155 470 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Gm23172-201ENSMUST00000157160 124 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Snord50b-201ENSMUST00000178497 72 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Gm44491-201ENSMUST00000196794 96 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Gm18617-201ENSMUST00000222311 259 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.55□□□□□ -2.16
H2afb1S4R1E0 Gm23101-201ENSMUST00000157550 137 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm24510-201ENSMUST00000174965 94 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm23002-201ENSMUST00000179221 107 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm22510-201ENSMUST00000179304 79 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm26336-201ENSMUST00000179449 79 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm26390-201ENSMUST00000179628 79 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm44563-201ENSMUST00000207958 178 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Snord118-201ENSMUST00000082965 135 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm24406-201ENSMUST00000083026 128 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Gm22421-201ENSMUST00000083058 107 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Mir429-201ENSMUST00000083493 83 ntBASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
H2afb1S4R1E0 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm25992-201ENSMUST00000102437 109 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm23841-201ENSMUST00000116951 114 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm14674-201ENSMUST00000117816 342 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm26150-201ENSMUST00000157426 151 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm25914-201ENSMUST00000157618 153 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm28020-201ENSMUST00000157739 67 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm26482-201ENSMUST00000158015 62 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm23219-201ENSMUST00000158123 87 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm26468-201ENSMUST00000158644 106 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm25642-201ENSMUST00000175137 66 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Snord87-201ENSMUST00000175437 87 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm34139-201ENSMUST00000196166 294 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Mir466e-201ENSMUST00000198862 84 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm5010-201ENSMUST00000213131 260 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm25357-201ENSMUST00000082745 72 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm25813-201ENSMUST00000082748 191 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Snora19-201ENSMUST00000082962 132 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm23658-201ENSMUST00000083233 132 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm24453-201ENSMUST00000083346 76 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Gm24522-201ENSMUST00000083964 108 ntBASIC1.53□□□□□ -2.16
H2afb1S4R1E0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm13433-201ENSMUST00000121701 240 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm26026-201ENSMUST00000122726 123 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm23043-201ENSMUST00000157890 109 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Mir6351-201ENSMUST00000183826 99 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm28912-201ENSMUST00000189001 234 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm37693-201ENSMUST00000194562 234 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm23370-201ENSMUST00000199545 130 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm45508-201ENSMUST00000209298 299 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm24536-201ENSMUST00000083144 107 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Gm10360-201ENSMUST00000097219 272 ntBASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
H2afb1S4R1E0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Gm24595-201ENSMUST00000122501 110 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Gm24262-201ENSMUST00000157431 144 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Gm25424-201ENSMUST00000157612 58 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Gm22768-201ENSMUST00000158366 153 ntBASIC1.51□□□□□ -2.17
H2afb1S4R1E0 Gm23141-201ENSMUST00000178682 94 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 168.1 ms