Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm28909-201ENSMUST00000189406 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28861-201ENSMUST00000189681 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm29180-201ENSMUST00000190003 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm29575-201ENSMUST00000190597 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm29631-201ENSMUST00000191065 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm29469-201ENSMUST00000191448 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Mir3535-201ENSMUST00000197651 147 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm24316-201ENSMUST00000083041 107 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trim3Q9R1R2 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trim3Q9R1R2 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Gm12309-201ENSMUST00000119889 182 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Gm22883-201ENSMUST00000157376 106 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Gm23339-201ENSMUST00000158962 139 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Gm44483-201ENSMUST00000197203 97 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Gm24966-201ENSMUST00000082443 79 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.25□□□□□ -2.21
Trim3Q9R1R2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm24440-201ENSMUST00000157236 63 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm25884-201ENSMUST00000157782 62 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm24501-201ENSMUST00000158452 62 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm24512-201ENSMUST00000174963 65 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm27640-201ENSMUST00000184580 147 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm27997-201ENSMUST00000184942 69 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm29512-201ENSMUST00000185544 315 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm37089-201ENSMUST00000195616 129 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm29818-201ENSMUST00000218070 165 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Gm23245-201ENSMUST00000083370 135 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Mir155-201ENSMUST00000083463 65 ntBASIC1.24□□□□□ -2.21
Trim3Q9R1R2 Mir767-201ENSMUST00000103256 107 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm12512-201ENSMUST00000119620 217 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm12924-201ENSMUST00000121747 318 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm22279-201ENSMUST00000157200 93 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm28008-201ENSMUST00000184021 186 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm37763-201ENSMUST00000193445 120 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm44468-201ENSMUST00000199516 105 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.23□□□□□ -2.21
Trim3Q9R1R2 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm23845-201ENSMUST00000083834 152 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.23□□□□□ -2.21
Trim3Q9R1R2 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm23836-201ENSMUST00000104434 129 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm23336-201ENSMUST00000117023 123 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm11794-201ENSMUST00000119446 237 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm22074-201ENSMUST00000158595 113 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm29665-201ENSMUST00000191457 528 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Mir465d-201ENSMUST00000196314 58 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm44858-201ENSMUST00000207360 154 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.22□□□□□ -2.21
Trim3Q9R1R2 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm25079-201ENSMUST00000082529 203 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm24038-201ENSMUST00000082872 159 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm23377-201ENSMUST00000082943 126 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm24042-201ENSMUST00000083114 103 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm25512-201ENSMUST00000083863 107 ntBASIC1.22□□□□□ -2.21
Trim3Q9R1R2 Gm26135-201ENSMUST00000101993 72 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm25848-201ENSMUST00000116790 144 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm22944-201ENSMUST00000158662 133 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm2962-201ENSMUST00000159266 336 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm17919-201ENSMUST00000173344 312 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm23967-201ENSMUST00000175062 78 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Snord50b-201ENSMUST00000178497 72 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm28409-201ENSMUST00000187064 103 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm19777-201ENSMUST00000191940 358 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.21□□□□□ -2.22
Trim3Q9R1R2 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Trim3Q9R1R2 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm25793-201ENSMUST00000083287 107 ntBASIC1.21□□□□□ -2.22
Trim3Q9R1R2 Gm24865-201ENSMUST00000103246 96 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Mir7675-201ENSMUST00000184262 58 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Gm29613-201ENSMUST00000185846 313 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Gm29544-201ENSMUST00000188860 313 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Gm28808-201ENSMUST00000190978 313 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Gm37801-201ENSMUST00000194754 274 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Gm42774-201ENSMUST00000198854 283 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Gm25204-201ENSMUST00000082843 106 ntBASIC1.2□□□□□ -2.22
Trim3Q9R1R2 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms