Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.37□□□□□ -1.87
Prpf40aQ9R1C7 Gm14502-201ENSMUST00000118154 113 ntBASIC3.37□□□□□ -1.87
Prpf40aQ9R1C7 Gm26091-201ENSMUST00000122704 82 ntBASIC3.37□□□□□ -1.87
Prpf40aQ9R1C7 Gm26061-201ENSMUST00000175584 108 ntBASIC3.37□□□□□ -1.87
Prpf40aQ9R1C7 Gm46233-201ENSMUST00000217831 449 ntBASIC3.37□□□□□ -1.87
Prpf40aQ9R1C7 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Mir673-201ENSMUST00000102361 91 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm26081-201ENSMUST00000104068 132 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm24171-201ENSMUST00000104126 131 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm24376-201ENSMUST00000104399 127 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Mir293-201ENSMUST00000104841 80 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm14843-201ENSMUST00000119596 212 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm23983-201ENSMUST00000157142 114 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm23113-201ENSMUST00000158477 99 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Snora2b-201ENSMUST00000084005 137 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.36□□□□□ -1.87
Prpf40aQ9R1C7 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Gm26297-201ENSMUST00000179464 132 ntBASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Gm45386-201ENSMUST00000210194 218 ntBASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Gm23738-201ENSMUST00000082828 171 ntBASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Snord118-201ENSMUST00000082965 135 ntBASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Mir466-201ENSMUST00000093591 73 ntBASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Prpf40aQ9R1C7 Gm25753-201ENSMUST00000116792 121 ntBASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Gm12954-201ENSMUST00000118610 611 ntBASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Gm26099-201ENSMUST00000157248 109 ntBASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Gm25364-201ENSMUST00000158851 107 ntBASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Mir669j-201ENSMUST00000179023 121 ntBASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Gm42844-201ENSMUST00000200355 112 ntBASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Gm22306-201ENSMUST00000082692 107 ntBASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.87
Prpf40aQ9R1C7 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm23391-201ENSMUST00000157579 104 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm25889-201ENSMUST00000157775 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm22187-201ENSMUST00000157819 129 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm24358-201ENSMUST00000158424 288 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm25380-201ENSMUST00000175463 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm24641-201ENSMUST00000178055 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm25484-201ENSMUST00000178217 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm26138-201ENSMUST00000179236 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm22821-201ENSMUST00000179288 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm23140-201ENSMUST00000082487 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm25588-201ENSMUST00000082501 140 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm23298-201ENSMUST00000083181 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm24614-201ENSMUST00000083269 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm22057-201ENSMUST00000083387 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm25516-201ENSMUST00000083857 107 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.33□□□□□ -1.88
Prpf40aQ9R1C7 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm12086-201ENSMUST00000120863 228 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm24138-201ENSMUST00000157572 114 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm25371-201ENSMUST00000158162 101 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm23090-201ENSMUST00000177331 78 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm25646-201ENSMUST00000178527 79 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm9156-201ENSMUST00000189660 463 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm43217-201ENSMUST00000199513 367 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Mir489-201ENSMUST00000093599 107 ntBASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Prpf40aQ9R1C7 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 AC124456.1-201ENSMUST00000217391 2597 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm22790-201ENSMUST00000157229 129 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm24559-201ENSMUST00000157519 121 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm22731-201ENSMUST00000158086 94 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm22535-201ENSMUST00000158174 119 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Mir7578-201ENSMUST00000183455 82 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm27783-201ENSMUST00000183534 105 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm27792-201ENSMUST00000184031 115 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm28647-201ENSMUST00000188416 197 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Gm23264-201ENSMUST00000083372 107 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Mir369-201ENSMUST00000083627 79 ntBASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Prpf40aQ9R1C7 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Prpf40aQ9R1C7 Gm25168-201ENSMUST00000104189 132 ntBASIC3.3□□□□□ -1.88
Prpf40aQ9R1C7 Mir878-201ENSMUST00000104680 78 ntBASIC3.3□□□□□ -1.88
Prpf40aQ9R1C7 Gm24894-201ENSMUST00000122744 118 ntBASIC3.3□□□□□ -1.88
Prpf40aQ9R1C7 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Prpf40aQ9R1C7 Gm22558-201ENSMUST00000157326 95 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms