Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.95□□□□□ -2.56
Scn11aQ9R053 Gm4746-201ENSMUST00000120395 2406 ntBASIC-0.95□□□□□ -2.56
Scn11aQ9R053 Gm15177-201ENSMUST00000120491 577 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 CT030184.1-201ENSMUST00000222393 416 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Mir669o-201ENSMUST00000103898 96 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm14551-201ENSMUST00000120802 256 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.96□□□□□ -2.56
Scn11aQ9R053 Mir654-201ENSMUST00000104787 84 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm8858-201ENSMUST00000118259 342 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm12143-201ENSMUST00000119666 332 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm11254-201ENSMUST00000122368 653 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Snord8-201ENSMUST00000175303 110 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm44870-201ENSMUST00000207291 357 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm25799-201ENSMUST00000082643 107 ntBASIC-0.97□□□□□ -2.56
Scn11aQ9R053 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.98□□□□□ -2.57
Scn11aQ9R053 Gm25956-201ENSMUST00000175115 217 ntBASIC-0.98□□□□□ -2.57
Scn11aQ9R053 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.98□□□□□ -2.57
Scn11aQ9R053 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.98□□□□□ -2.57
Scn11aQ9R053 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC-0.98□□□□□ -2.57
Scn11aQ9R053 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.98□□□□□ -2.57
Scn11aQ9R053 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.98□□□□□ -2.57
Scn11aQ9R053 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Adgrg4-206ENSMUST00000168724 531 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm19901-201ENSMUST00000192191 495 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm44665-201ENSMUST00000205381 251 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm25739-201ENSMUST00000082886 107 ntBASIC-0.99□□□□□ -2.57
Scn11aQ9R053 Gm24142-201ENSMUST00000101960 107 ntBASIC-1□□□□□ -2.57
Scn11aQ9R053 Gm26249-201ENSMUST00000116708 118 ntBASIC-1□□□□□ -2.57
Scn11aQ9R053 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-1□□□□□ -2.57
Scn11aQ9R053 AC116465.1-201ENSMUST00000220324 235 ntBASIC-1□□□□□ -2.57
Scn11aQ9R053 Gm22743-201ENSMUST00000083445 133 ntBASIC-1□□□□□ -2.57
Scn11aQ9R053 n-R5s12-201ENSMUST00000083785 119 ntBASIC-1□□□□□ -2.57
Scn11aQ9R053 Gm45557-201ENSMUST00000210004 1651 ntBASIC-1□□□□□ -2.57
Scn11aQ9R053 Gm23691-201ENSMUST00000101878 107 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm25213-201ENSMUST00000102388 113 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm22586-201ENSMUST00000157507 122 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Mir100-201ENSMUST00000175270 80 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm12045-201ENSMUST00000122122 573 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm25884-201ENSMUST00000157782 62 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm20391-201ENSMUST00000174722 106 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm23159-201ENSMUST00000175088 77 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Gm37923-201ENSMUST00000191624 161 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 Mir490-201ENSMUST00000093567 84 ntBASIC-1.01□□□□□ -2.57
Scn11aQ9R053 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-1.02□□□□□ -2.57
Scn11aQ9R053 Gm25102-201ENSMUST00000122479 112 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 Gm24843-201ENSMUST00000158682 76 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 Gm44325-201ENSMUST00000196757 77 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
Scn11aQ9R053 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 AC147633.1-201ENSMUST00000225134 259 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 AC167977.2-201ENSMUST00000225676 682 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 Snora16a-201ENSMUST00000083163 136 ntBASIC-1.02□□□□□ -2.57
Scn11aQ9R053 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-1.03□□□□□ -2.57
Scn11aQ9R053 Gm43367-201ENSMUST00000199986 625 ntBASIC-1.03□□□□□ -2.57
Scn11aQ9R053 Gm23454-201ENSMUST00000083332 133 ntBASIC-1.03□□□□□ -2.57
Scn11aQ9R053 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-1.03□□□□□ -2.57
Scn11aQ9R053 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.03□□□□□ -2.58
Scn11aQ9R053 Gm9059-201ENSMUST00000118319 183 ntBASIC-1.03□□□□□ -2.58
Scn11aQ9R053 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-1.03□□□□□ -2.58
Scn11aQ9R053 Snora62-201ENSMUST00000082991 149 ntBASIC-1.03□□□□□ -2.58
Scn11aQ9R053 Gm23645-201ENSMUST00000083228 108 ntBASIC-1.03□□□□□ -2.58
Scn11aQ9R053 Gm13729-201ENSMUST00000120328 406 ntBASIC-1.04□□□□□ -2.58
Scn11aQ9R053 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-1.04□□□□□ -2.58
Scn11aQ9R053 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.04□□□□□ -2.58
Scn11aQ9R053 Gm23116-201ENSMUST00000158481 67 ntBASIC-1.04□□□□□ -2.58
Scn11aQ9R053 AC130821.1-201ENSMUST00000221997 293 ntBASIC-1.04□□□□□ -2.58
Scn11aQ9R053 Gm22814-201ENSMUST00000157452 104 ntBASIC-1.05□□□□□ -2.58
Scn11aQ9R053 Gm26349-201ENSMUST00000157530 130 ntBASIC-1.05□□□□□ -2.58
Scn11aQ9R053 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC-1.05□□□□□ -2.58
Scn11aQ9R053 Gm23055-201ENSMUST00000082805 94 ntBASIC-1.05□□□□□ -2.58
Scn11aQ9R053 Gm25269-201ENSMUST00000122601 104 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Mir3473d-201ENSMUST00000175346 81 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm19885-201ENSMUST00000212853 343 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm26071-201ENSMUST00000083261 107 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm22576-201ENSMUST00000083733 104 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm23733-201ENSMUST00000083750 106 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm2020-201ENSMUST00000145242 579 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm24481-201ENSMUST00000157210 102 ntBASIC-1.06□□□□□ -2.58
Scn11aQ9R053 Gm22038-201ENSMUST00000157277 242 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 154.5 ms