Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm26479-201ENSMUST00000122620 106 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm22984-201ENSMUST00000122751 122 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm23982-201ENSMUST00000157141 106 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm23390-201ENSMUST00000157393 106 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm24222-201ENSMUST00000158834 93 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm23289-201ENSMUST00000175615 108 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm27517-201ENSMUST00000184347 236 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm27421-201ENSMUST00000184729 167 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Mir8090-201ENSMUST00000185078 136 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm23370-201ENSMUST00000199545 130 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm44408-201ENSMUST00000200205 66 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm26497-201ENSMUST00000083146 107 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm26495-201ENSMUST00000083152 137 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm23039-201ENSMUST00000083870 161 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Mir301b-201ENSMUST00000102333 97 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm23656-201ENSMUST00000122626 112 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm24440-201ENSMUST00000157236 63 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm22082-201ENSMUST00000157587 161 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm24847-201ENSMUST00000158032 108 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm24668-201ENSMUST00000158935 104 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm24512-201ENSMUST00000174963 65 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Mir6351-201ENSMUST00000183826 99 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Gm25513-201ENSMUST00000083861 162 ntBASIC1.65□□□□□ -2.15
Cpsf3Q9QXK7 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Gm14922-201ENSMUST00000121131 163 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Gm23581-201ENSMUST00000158531 63 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Mir6419-201ENSMUST00000184784 113 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Gm28912-201ENSMUST00000189001 234 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Gm29140-201ENSMUST00000190187 476 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Gm45365-201ENSMUST00000209489 256 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Mir155-201ENSMUST00000083463 65 ntBASIC1.64□□□□□ -2.15
Cpsf3Q9QXK7 Gm26339-201ENSMUST00000102368 99 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm25938-201ENSMUST00000104139 166 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Mir875-201ENSMUST00000104698 78 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm14882-201ENSMUST00000117216 218 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm24262-201ENSMUST00000157431 144 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm24076-201ENSMUST00000158179 94 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Mir3057-201ENSMUST00000175040 91 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm29490-201ENSMUST00000190923 342 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Mir3970-201ENSMUST00000199287 90 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm44909-201ENSMUST00000208756 165 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 Gm23679-201ENSMUST00000083161 119 ntBASIC1.63□□□□□ -2.15
Cpsf3Q9QXK7 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 Gm25875-201ENSMUST00000104323 107 ntBASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 Gm22101-201ENSMUST00000157928 103 ntBASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 Gm44352-201ENSMUST00000196358 110 ntBASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 Gm42774-201ENSMUST00000198854 283 ntBASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 Gm9795-201ENSMUST00000062156 693 ntBASIC1.62□□□□□ -2.15
Cpsf3Q9QXK7 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm11606-201ENSMUST00000120706 617 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm6025-201ENSMUST00000121517 201 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm14491-201ENSMUST00000121919 199 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm22321-201ENSMUST00000157152 104 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm23536-201ENSMUST00000157541 134 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm23558-201ENSMUST00000157823 80 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm26022-201ENSMUST00000158663 108 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm25831-201ENSMUST00000158924 163 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm27898-201ENSMUST00000183987 80 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Gm24042-201ENSMUST00000083114 103 ntBASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Cpsf3Q9QXK7 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Mir293-201ENSMUST00000104841 80 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Gm23718-201ENSMUST00000157350 307 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Gm23182-201ENSMUST00000158688 135 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Gm25615-201ENSMUST00000177836 94 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Gm23378-201ENSMUST00000082942 107 ntBASIC1.6□□□□□ -2.15
Cpsf3Q9QXK7 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm24902-201ENSMUST00000158126 123 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm23208-201ENSMUST00000158666 127 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm25958-201ENSMUST00000175114 71 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm22118-201ENSMUST00000175593 171 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm25397-201ENSMUST00000176951 92 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm23003-201ENSMUST00000179948 107 ntBASIC1.59□□□□□ -2.15
Cpsf3Q9QXK7 Gm29308-201ENSMUST00000188863 315 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 159.4 ms