Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25697-201ENSMUST00000082902 98 ntBASIC0.67□□□□□ -2.3
Trem1Q9JKE2 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Trem1Q9JKE2 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Trem1Q9JKE2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Mir767-201ENSMUST00000103256 107 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm23130-201ENSMUST00000104252 74 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm25825-201ENSMUST00000157091 124 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm23898-201ENSMUST00000158111 103 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm20630-201ENSMUST00000177387 551 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm25284-201ENSMUST00000180345 141 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm28288-201ENSMUST00000191019 214 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm45543-201ENSMUST00000209327 88 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm25627-201ENSMUST00000084003 153 ntBASIC0.66□□□□□ -2.3
Trem1Q9JKE2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Gm23230-201ENSMUST00000157298 133 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Gm24076-201ENSMUST00000158179 94 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Gm25768-201ENSMUST00000158570 98 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Cfap61-214ENSMUST00000167179 183 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Gm27365-201ENSMUST00000184041 177 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Mir32-201ENSMUST00000083610 70 ntBASIC0.65□□□□□ -2.31
Trem1Q9JKE2 Gm25434-201ENSMUST00000158278 167 ntBASIC0.64□□□□□ -2.31
Trem1Q9JKE2 Gm24942-201ENSMUST00000158328 114 ntBASIC0.64□□□□□ -2.31
Trem1Q9JKE2 Gm23921-201ENSMUST00000175258 107 ntBASIC0.64□□□□□ -2.31
Trem1Q9JKE2 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trem1Q9JKE2 Gm19777-201ENSMUST00000191940 358 ntBASIC0.64□□□□□ -2.31
Trem1Q9JKE2 Gm43898-201ENSMUST00000204456 424 ntBASIC0.64□□□□□ -2.31
Trem1Q9JKE2 Gm44976-201ENSMUST00000205543 261 ntBASIC0.64□□□□□ -2.31
Trem1Q9JKE2 Gm25485-201ENSMUST00000104120 132 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Gm24393-201ENSMUST00000158135 97 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Mir6364-201ENSMUST00000183396 86 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Gm20257-202ENSMUST00000188643 130 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Gm18188-201ENSMUST00000219386 478 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Gm24035-201ENSMUST00000082867 107 ntBASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
Trem1Q9JKE2 Gm24579-201ENSMUST00000103964 144 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Gm11856-201ENSMUST00000118712 276 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Gm11798-201ENSMUST00000119150 421 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Gm23289-201ENSMUST00000175615 108 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Gm36956-201ENSMUST00000193830 214 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Mir34a-201ENSMUST00000083559 102 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.62□□□□□ -2.31
Trem1Q9JKE2 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Gm22888-201ENSMUST00000158640 77 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Gm24678-201ENSMUST00000158756 104 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Gm44473-201ENSMUST00000204039 152 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Gm23614-201ENSMUST00000082598 107 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Mir27b-201ENSMUST00000083541 73 ntBASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
Trem1Q9JKE2 Gm24283-201ENSMUST00000104233 107 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm25378-201ENSMUST00000104333 129 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm22796-201ENSMUST00000157234 106 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Mir1931-201ENSMUST00000158589 119 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm25838-201ENSMUST00000158920 120 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm16404-201ENSMUST00000177739 468 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm7958-201ENSMUST00000178255 468 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm7950-201ENSMUST00000179633 468 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm14598-201ENSMUST00000180109 468 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm14625-201ENSMUST00000180231 468 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm43250-201ENSMUST00000196536 273 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm34783-201ENSMUST00000209159 303 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Gm23735-201ENSMUST00000082551 134 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Snord33-201ENSMUST00000083694 84 ntBASIC0.6□□□□□ -2.31
Trem1Q9JKE2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Trem1Q9JKE2 Gm25783-201ENSMUST00000122525 190 ntBASIC0.59□□□□□ -2.31
Trem1Q9JKE2 Gm23232-201ENSMUST00000157300 105 ntBASIC0.59□□□□□ -2.31
Trem1Q9JKE2 Gm27540-201ENSMUST00000184950 187 ntBASIC0.59□□□□□ -2.31
Trem1Q9JKE2 Gm22294-201ENSMUST00000083308 104 ntBASIC0.59□□□□□ -2.31
Trem1Q9JKE2 Mir654-201ENSMUST00000104787 84 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Mir880-201ENSMUST00000104809 78 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm12770-201ENSMUST00000121734 462 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm22598-201ENSMUST00000157600 127 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm22522-201ENSMUST00000158271 151 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm22914-201ENSMUST00000175195 77 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm23355-201ENSMUST00000177614 107 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm23148-201ENSMUST00000180367 107 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Mir6962-201ENSMUST00000199512 63 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm44465-201ENSMUST00000199536 114 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm23625-201ENSMUST00000082457 100 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm25636-201ENSMUST00000082666 133 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm25258-201ENSMUST00000083049 107 ntBASIC0.58□□□□□ -2.32
Trem1Q9JKE2 Gm22215-201ENSMUST00000157558 96 ntBASIC0.57□□□□□ -2.32
Trem1Q9JKE2 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms