Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm24630-201ENSMUST00000122768 106 ntBASIC0.03□□□□□ -2.4
Trem3Q9JKE1 Gm23898-201ENSMUST00000158111 103 ntBASIC0.03□□□□□ -2.4
Trem3Q9JKE1 Scarna8-201ENSMUST00000158333 131 ntBASIC0.03□□□□□ -2.4
Trem3Q9JKE1 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.03□□□□□ -2.4
Trem3Q9JKE1 Mir3108-201ENSMUST00000175500 79 ntBASIC0.03□□□□□ -2.4
Trem3Q9JKE1 Gm44395-201ENSMUST00000197056 153 ntBASIC0.03□□□□□ -2.4
Trem3Q9JKE1 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Mir465c-2-201ENSMUST00000104757 81 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm23853-201ENSMUST00000158375 104 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm22200-201ENSMUST00000158614 67 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm24618-201ENSMUST00000177718 94 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm23953-201ENSMUST00000178214 94 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm26332-201ENSMUST00000179813 94 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm22863-201ENSMUST00000180265 94 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.02□□□□□ -2.41
Trem3Q9JKE1 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Mir224-201ENSMUST00000083608 82 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Mir465c-1-201ENSMUST00000093560 81 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.02□□□□□ -2.41
Trem3Q9JKE1 Gm14775-201ENSMUST00000122089 310 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm26274-201ENSMUST00000157103 321 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm23411-201ENSMUST00000157988 62 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm23352-201ENSMUST00000158428 64 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm25949-201ENSMUST00000175333 114 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Mir496b-201ENSMUST00000184935 113 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm28343-201ENSMUST00000185386 112 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm44010-201ENSMUST00000204432 331 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm45658-201ENSMUST00000209197 580 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm45403-201ENSMUST00000209453 276 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Gm35558-203ENSMUST00000222264 204 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Trem3Q9JKE1 Mir709-201ENSMUST00000102190 88 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm25318-201ENSMUST00000122554 314 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm22888-201ENSMUST00000158640 77 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm25838-201ENSMUST00000158920 120 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm23416-201ENSMUST00000175520 95 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm29640-201ENSMUST00000187972 278 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm28256-201ENSMUST00000188953 139 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm28559-201ENSMUST00000190532 139 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Gm37997-201ENSMUST00000193515 267 ntBASIC0□□□□□ -2.41
Trem3Q9JKE1 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm22003-201ENSMUST00000101885 107 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Snord89-201ENSMUST00000104516 110 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm23111-201ENSMUST00000122652 105 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm23025-201ENSMUST00000158769 111 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Zfp950-206ENSMUST00000178819 171 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm22756-201ENSMUST00000180118 107 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm42506-201ENSMUST00000202009 150 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm8219-201ENSMUST00000218309 242 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Snord95-201ENSMUST00000082846 68 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm24356-201ENSMUST00000082859 106 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm23095-201ENSMUST00000083446 107 ntBASIC-0.01□□□□□ -2.41
Trem3Q9JKE1 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm22239-201ENSMUST00000175220 103 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm24799-201ENSMUST00000178431 79 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm27402-201ENSMUST00000183890 120 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Mir34a-201ENSMUST00000083559 102 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.02□□□□□ -2.41
Trem3Q9JKE1 Mir880-201ENSMUST00000104809 78 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 Gm16186-201ENSMUST00000120132 216 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 Gm24085-201ENSMUST00000175172 116 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 Gm28288-201ENSMUST00000191019 214 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 CT010454.1-201ENSMUST00000225975 265 ntBASIC-0.03□□□□□ -2.41
Trem3Q9JKE1 Gm12225-201ENSMUST00000117995 298 ntBASIC-0.04□□□□□ -2.42
Trem3Q9JKE1 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.04□□□□□ -2.42
Trem3Q9JKE1 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-0.04□□□□□ -2.42
Trem3Q9JKE1 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm26500-201ENSMUST00000101867 106 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm22673-201ENSMUST00000104415 131 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm15379-201ENSMUST00000121224 648 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm24768-201ENSMUST00000158512 94 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm23145-201ENSMUST00000178912 79 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 AL772265.1-201ENSMUST00000214379 305 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 AC112972.1-201ENSMUST00000227329 365 ntBASIC-0.05□□□□□ -2.42
Trem3Q9JKE1 Gm26384-201ENSMUST00000102183 110 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm25170-201ENSMUST00000104191 129 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm11798-201ENSMUST00000119150 421 ntBASIC-0.06□□□□□ -2.42
Trem3Q9JKE1 Gm25805-201ENSMUST00000122788 108 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 143 ms