Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm24907-201ENSMUST00000116932 128 ntBASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm14491-201ENSMUST00000121919 199 ntBASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm24594-201ENSMUST00000122502 99 ntBASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm26468-201ENSMUST00000158644 106 ntBASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm27979-201ENSMUST00000185126 56 ntBASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm35736-201ENSMUST00000203681 313 ntBASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Mir151-201ENSMUST00000083678 68 ntBASIC2.09□□□□□ -2.07
Trim54Q9ERP3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Gm22494-201ENSMUST00000104495 128 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Mir293-201ENSMUST00000104841 80 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Gm25333-201ENSMUST00000158035 246 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Gm23854-201ENSMUST00000158378 108 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 Gm23289-201ENSMUST00000175615 108 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.08□□□□□ -2.08
Trim54Q9ERP3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm24478-201ENSMUST00000157439 158 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm24851-201ENSMUST00000158028 103 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm25994-201ENSMUST00000175392 101 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm23002-201ENSMUST00000179221 107 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm27722-201ENSMUST00000183908 76 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm22421-201ENSMUST00000083058 107 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm24042-201ENSMUST00000083114 103 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Gm24453-201ENSMUST00000083346 76 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trim54Q9ERP3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Trim54Q9ERP3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Gm15162-201ENSMUST00000119325 283 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Gm12686-201ENSMUST00000120546 397 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Gm23390-201ENSMUST00000157393 106 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Mir1949-201ENSMUST00000157434 141 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Mir1951-201ENSMUST00000157981 89 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Gm17113-201ENSMUST00000170118 171 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Mir7679-201ENSMUST00000183379 63 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Mir6352-201ENSMUST00000184495 116 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Gm43865-201ENSMUST00000204721 127 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Gm23377-201ENSMUST00000082943 126 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Gm24412-201ENSMUST00000083426 109 ntBASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Trim54Q9ERP3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm23705-201ENSMUST00000104370 130 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm22075-201ENSMUST00000158599 192 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm26024-201ENSMUST00000158657 322 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm26022-201ENSMUST00000158663 108 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm27421-201ENSMUST00000184729 167 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm29022-201ENSMUST00000190702 225 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm44408-201ENSMUST00000200205 66 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm26922-201ENSMUST00000082687 72 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Mir301-201ENSMUST00000083655 86 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Mir107-201ENSMUST00000083660 87 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Snora33-201ENSMUST00000093556 129 ntBASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim54Q9ERP3 Gm25938-201ENSMUST00000104139 166 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 Gm15281-201ENSMUST00000125181 351 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 Gm20477-201ENSMUST00000174028 280 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.04□□□□□ -2.08
Trim54Q9ERP3 Gm45859-201ENSMUST00000212794 214 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 Mir30d-201ENSMUST00000083503 82 ntBASIC2.04□□□□□ -2.08
Trim54Q9ERP3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim54Q9ERP3 Gm23571-201ENSMUST00000180073 127 ntBASIC2.03□□□□□ -2.08
Trim54Q9ERP3 Mir6388-201ENSMUST00000184417 75 ntBASIC2.03□□□□□ -2.08
Trim54Q9ERP3 Gm34139-201ENSMUST00000196166 294 ntBASIC2.03□□□□□ -2.08
Trim54Q9ERP3 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
Trim54Q9ERP3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim54Q9ERP3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Mir7678-201ENSMUST00000185076 71 ntBASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Gm28912-201ENSMUST00000189001 234 ntBASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.02□□□□□ -2.09
Trim54Q9ERP3 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.02□□□□□ -2.09
Trim54Q9ERP3 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Gm24522-201ENSMUST00000083964 108 ntBASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trim54Q9ERP3 Gm23841-201ENSMUST00000116951 114 ntBASIC2.01□□□□□ -2.09
Trim54Q9ERP3 Gm11204-201ENSMUST00000122438 147 ntBASIC2.01□□□□□ -2.09
Trim54Q9ERP3 Gm23469-201ENSMUST00000157131 104 ntBASIC2.01□□□□□ -2.09
Trim54Q9ERP3 Gm23101-201ENSMUST00000157550 137 ntBASIC2.01□□□□□ -2.09
Trim54Q9ERP3 Gm24770-201ENSMUST00000158505 92 ntBASIC2.01□□□□□ -2.09
Trim54Q9ERP3 Gm23182-201ENSMUST00000158688 135 ntBASIC2.01□□□□□ -2.09
Trim54Q9ERP3 Gm23194-201ENSMUST00000158813 105 ntBASIC2.01□□□□□ -2.09
Trim54Q9ERP3 Gm25749-201ENSMUST00000175485 111 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms