Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm26338-201ENSMUST00000102372 110 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm25909-201ENSMUST00000157619 121 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm24853-201ENSMUST00000158026 121 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm43250-201ENSMUST00000196536 273 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm44396-201ENSMUST00000199843 114 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm23627-201ENSMUST00000082459 107 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm22502-201ENSMUST00000082488 107 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm22977-201ENSMUST00000082615 107 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm24149-201ENSMUST00000082757 107 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm23721-201ENSMUST00000083005 107 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Snord32a-201ENSMUST00000083285 83 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm25650-201ENSMUST00000083784 162 ntBASIC0.63□□□□□ -2.31
Lima1Q9ERG0 Gm23013-201ENSMUST00000104146 106 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm12433-201ENSMUST00000119659 255 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm25750-201ENSMUST00000175483 112 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm22802-201ENSMUST00000175621 89 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm29490-201ENSMUST00000190923 342 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm44326-201ENSMUST00000198226 101 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Gm22884-201ENSMUST00000083127 140 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Mir216a-201ENSMUST00000083605 72 ntBASIC0.62□□□□□ -2.31
Lima1Q9ERG0 Mir695-201ENSMUST00000102261 109 ntBASIC0.61□□□□□ -2.31
Lima1Q9ERG0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Lima1Q9ERG0 Gm24393-201ENSMUST00000158135 97 ntBASIC0.61□□□□□ -2.31
Lima1Q9ERG0 Gm25284-201ENSMUST00000180345 141 ntBASIC0.61□□□□□ -2.31
Lima1Q9ERG0 Gm28408-201ENSMUST00000191557 463 ntBASIC0.61□□□□□ -2.31
Lima1Q9ERG0 Gm43898-201ENSMUST00000204456 424 ntBASIC0.61□□□□□ -2.31
Lima1Q9ERG0 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.61□□□□□ -2.31
Lima1Q9ERG0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Lima1Q9ERG0 Gm3867-201ENSMUST00000086108 279 ntBASIC0.61□□□□□ -2.31
Lima1Q9ERG0 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Lima1Q9ERG0 Gm11794-201ENSMUST00000119446 237 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm16404-201ENSMUST00000177739 468 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm7958-201ENSMUST00000178255 468 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm7950-201ENSMUST00000179633 468 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm14598-201ENSMUST00000180109 468 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm14625-201ENSMUST00000180231 468 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm27539-201ENSMUST00000184971 224 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm44811-201ENSMUST00000209120 228 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Mir362-201ENSMUST00000093592 65 ntBASIC0.6□□□□□ -2.31
Lima1Q9ERG0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Gm16265-201ENSMUST00000134558 108 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Gm23059-201ENSMUST00000158978 107 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Gm27410-201ENSMUST00000183851 115 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Gm28862-201ENSMUST00000188246 163 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Gm34015-201ENSMUST00000194908 451 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.59□□□□□ -2.31
Lima1Q9ERG0 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 Mir32-201ENSMUST00000083610 70 ntBASIC0.59□□□□□ -2.31
Lima1Q9ERG0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.59□□□□□ -2.32
Lima1Q9ERG0 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Gm23142-201ENSMUST00000101848 105 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Gm26240-201ENSMUST00000101893 105 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Gm14846-201ENSMUST00000121868 216 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Mir6364-201ENSMUST00000183396 86 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Gm28288-201ENSMUST00000191019 214 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Gm19777-201ENSMUST00000191940 358 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 DQ267101-201ENSMUST00000082562 73 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Gm25697-201ENSMUST00000082902 98 ntBASIC0.58□□□□□ -2.32
Lima1Q9ERG0 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm23542-201ENSMUST00000158208 96 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm26914-201ENSMUST00000182262 223 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm28921-201ENSMUST00000190219 378 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm22302-201ENSMUST00000082657 106 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm25930-201ENSMUST00000082785 107 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm24523-201ENSMUST00000083965 132 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Mir490-201ENSMUST00000093567 84 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.57□□□□□ -2.32
Lima1Q9ERG0 Gm23203-201ENSMUST00000104374 107 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Gm11798-201ENSMUST00000119150 421 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Gm24818-201ENSMUST00000175093 161 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Gm23355-201ENSMUST00000177614 107 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Mir6540-201ENSMUST00000184886 108 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Gm29229-201ENSMUST00000188874 323 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.56□□□□□ -2.32
Lima1Q9ERG0 Gm44308-201ENSMUST00000197080 99 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms