Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm45403-201ENSMUST00000209453 276 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm23041-201ENSMUST00000083868 106 ntBASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Scn4aQ9ER60 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Mir293-201ENSMUST00000104841 80 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm11420-201ENSMUST00000120047 402 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm23172-201ENSMUST00000157160 124 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm23232-201ENSMUST00000157300 105 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm25671-201ENSMUST00000178612 105 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm23307-201ENSMUST00000179167 105 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm25286-201ENSMUST00000179790 105 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm7654-201ENSMUST00000186738 683 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm44654-201ENSMUST00000208052 329 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Mir340-201ENSMUST00000083483 98 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.34□□□□□ -2.19
Scn4aQ9ER60 Gm24116-201ENSMUST00000103975 107 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm22113-201ENSMUST00000158343 104 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Mir7661-201ENSMUST00000197023 61 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm25827-201ENSMUST00000157089 107 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm23419-201ENSMUST00000175523 84 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm23186-201ENSMUST00000180078 107 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm28925-201ENSMUST00000188586 168 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm19777-201ENSMUST00000191940 358 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Scn4aQ9ER60 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.33□□□□□ -2.2
Scn4aQ9ER60 Gm23535-201ENSMUST00000157542 106 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Gm25423-201ENSMUST00000157609 107 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Gm22315-201ENSMUST00000158010 143 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Gm20386-201ENSMUST00000174010 132 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Gm25450-201ENSMUST00000179144 107 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Gm44491-201ENSMUST00000196794 96 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Gm44962-201ENSMUST00000206460 279 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.32□□□□□ -2.2
Scn4aQ9ER60 Gm25982-201ENSMUST00000157920 101 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.31□□□□□ -2.2
Scn4aQ9ER60 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.31□□□□□ -2.2
Scn4aQ9ER60 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Mir32-201ENSMUST00000083610 70 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Gm26255-201ENSMUST00000122492 103 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Gm46997-201ENSMUST00000222108 217 ntBASIC1.31□□□□□ -2.2
Scn4aQ9ER60 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.31□□□□□ -2.2
Scn4aQ9ER60 Gm22215-201ENSMUST00000157558 96 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm22085-201ENSMUST00000158344 110 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm17067-202ENSMUST00000180131 123 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm26914-201ENSMUST00000182262 223 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm27517-201ENSMUST00000184347 236 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm37313-201ENSMUST00000191673 290 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm37763-201ENSMUST00000193445 120 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm37089-201ENSMUST00000195616 129 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm43250-201ENSMUST00000196536 273 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm44384-201ENSMUST00000200208 114 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm25793-201ENSMUST00000083287 107 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm25789-201ENSMUST00000083294 76 ntBASIC1.3□□□□□ -2.2
Scn4aQ9ER60 Gm22279-201ENSMUST00000157200 93 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm24192-201ENSMUST00000157978 145 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm27587-201ENSMUST00000185116 163 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm37713-201ENSMUST00000191746 198 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm37997-201ENSMUST00000193515 267 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm23390-201ENSMUST00000157393 106 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm24504-201ENSMUST00000157679 100 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm23208-201ENSMUST00000158666 127 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm25491-201ENSMUST00000158733 308 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm22862-201ENSMUST00000178593 121 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm29229-201ENSMUST00000188874 323 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.29□□□□□ -2.2
Scn4aQ9ER60 Gm12143-201ENSMUST00000119666 332 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 Gm16399-201ENSMUST00000181423 219 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 Gm38109-201ENSMUST00000195386 181 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 Gm45116-201ENSMUST00000207392 275 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 Gm45207-201ENSMUST00000207469 145 ntBASIC1.28□□□□□ -2.2
Scn4aQ9ER60 Gm25079-201ENSMUST00000082529 203 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms