Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm27236-201ENSMUST00000184147 442 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm23641-201ENSMUST00000157857 101 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.98□□□□□ -2.57
Cpsf1Q9EPU4 Gm15175-201ENSMUST00000117629 132 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm14359-201ENSMUST00000118883 424 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm15279-201ENSMUST00000155593 288 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm22586-201ENSMUST00000157507 122 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Ighv1-32-201ENSMUST00000195149 351 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm19032-201ENSMUST00000208584 592 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm45247-201ENSMUST00000210757 309 ntBASIC-0.99□□□□□ -2.57
Cpsf1Q9EPU4 Gm12143-201ENSMUST00000119666 332 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 Gm24634-201ENSMUST00000158672 107 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 Mir6346-201ENSMUST00000183982 81 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 Gm19901-201ENSMUST00000192191 495 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 Gm44300-201ENSMUST00000196792 121 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 AC163033.1-201ENSMUST00000218608 157 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 AC167977.2-201ENSMUST00000225676 682 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 Gm23453-201ENSMUST00000083326 106 ntBASIC-1□□□□□ -2.57
Cpsf1Q9EPU4 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm24116-201ENSMUST00000103975 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm24584-201ENSMUST00000157972 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm25211-201ENSMUST00000177553 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm25101-201ENSMUST00000179057 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm25173-201ENSMUST00000179794 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm35212-201ENSMUST00000196672 606 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm44602-201ENSMUST00000205948 132 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 AC133654.1-201ENSMUST00000228411 672 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm26324-201ENSMUST00000083073 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm26127-201ENSMUST00000083193 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm23732-201ENSMUST00000083751 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm22352-201ENSMUST00000083917 107 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm25627-201ENSMUST00000084003 153 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm37630-201ENSMUST00000194210 1456 ntBASIC-1.01□□□□□ -2.57
Cpsf1Q9EPU4 Gm24481-201ENSMUST00000157210 102 ntBASIC-1.02□□□□□ -2.57
Cpsf1Q9EPU4 Gm24137-201ENSMUST00000180055 79 ntBASIC-1.02□□□□□ -2.57
Cpsf1Q9EPU4 Gm22391-201ENSMUST00000180356 79 ntBASIC-1.02□□□□□ -2.57
Cpsf1Q9EPU4 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-1.02□□□□□ -2.57
Cpsf1Q9EPU4 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-1.02□□□□□ -2.57
Cpsf1Q9EPU4 n-R5s12-201ENSMUST00000083785 119 ntBASIC-1.02□□□□□ -2.57
Cpsf1Q9EPU4 Mir687-201ENSMUST00000102166 89 ntBASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 Gm12106-201ENSMUST00000116006 1200 ntBASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 Gm22838-201ENSMUST00000158437 99 ntBASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 Mir344-2-201ENSMUST00000175446 80 ntBASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 AC154552.5-201ENSMUST00000222352 207 ntBASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 Mir490-201ENSMUST00000093567 84 ntBASIC-1.03□□□□□ -2.57
Cpsf1Q9EPU4 Gm11254-201ENSMUST00000122368 653 ntBASIC-1.04□□□□□ -2.58
Cpsf1Q9EPU4 Gm22038-201ENSMUST00000157277 242 ntBASIC-1.04□□□□□ -2.58
Cpsf1Q9EPU4 Gm22466-201ENSMUST00000175278 69 ntBASIC-1.04□□□□□ -2.58
Cpsf1Q9EPU4 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
Cpsf1Q9EPU4 Gm43026-201ENSMUST00000202972 325 ntBASIC-1.04□□□□□ -2.58
Cpsf1Q9EPU4 Gm24409-201ENSMUST00000157881 152 ntBASIC-1.05□□□□□ -2.58
Cpsf1Q9EPU4 Mir1936-201ENSMUST00000158699 93 ntBASIC-1.05□□□□□ -2.58
Cpsf1Q9EPU4 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-1.05□□□□□ -2.58
Cpsf1Q9EPU4 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-1.05□□□□□ -2.58
Cpsf1Q9EPU4 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.05□□□□□ -2.58
Cpsf1Q9EPU4 Gm24460-201ENSMUST00000082731 106 ntBASIC-1.05□□□□□ -2.58
Cpsf1Q9EPU4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-1.05□□□□□ -2.58
Cpsf1Q9EPU4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Mir1899-201ENSMUST00000122798 96 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm2020-201ENSMUST00000145242 579 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm26365-201ENSMUST00000179177 94 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm43472-201ENSMUST00000200175 154 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 AC115735.2-201ENSMUST00000227135 351 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Mir96-201ENSMUST00000083652 106 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm12086-201ENSMUST00000120863 228 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm23535-201ENSMUST00000157542 106 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Snord116l14-201ENSMUST00000179875 94 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Trdv3-201ENSMUST00000198551 309 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm26446-201ENSMUST00000082455 103 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.06□□□□□ -2.58
Cpsf1Q9EPU4 Gm24843-201ENSMUST00000158682 76 ntBASIC-1.07□□□□□ -2.58
Cpsf1Q9EPU4 Gm26430-201ENSMUST00000178054 107 ntBASIC-1.07□□□□□ -2.58
Cpsf1Q9EPU4 Gm44125-201ENSMUST00000203068 448 ntBASIC-1.07□□□□□ -2.58
Cpsf1Q9EPU4 Gm22303-201ENSMUST00000082686 122 ntBASIC-1.07□□□□□ -2.58
Cpsf1Q9EPU4 Gm22743-201ENSMUST00000083445 133 ntBASIC-1.07□□□□□ -2.58
Cpsf1Q9EPU4 Gm23184-201ENSMUST00000122594 131 ntBASIC-1.08□□□□□ -2.58
Cpsf1Q9EPU4 Gm25253-201ENSMUST00000179958 107 ntBASIC-1.08□□□□□ -2.58
Cpsf1Q9EPU4 Gm19777-201ENSMUST00000191940 358 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms