Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Gm23060-201ENSMUST00000102345 109 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Gm14574-201ENSMUST00000120644 279 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Gm23232-201ENSMUST00000157300 105 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Gm22929-201ENSMUST00000175517 107 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Mir376a-201ENSMUST00000197584 68 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Gm26224-201ENSMUST00000082506 80 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Mir27b-201ENSMUST00000083541 73 ntBASIC0.95□□□□□ -2.26
Cdc40Q9DC48 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm25773-201ENSMUST00000116718 127 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm25663-201ENSMUST00000157698 135 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm24221-201ENSMUST00000158833 313 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Mir6394-201ENSMUST00000184738 99 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm43250-201ENSMUST00000196536 273 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm44325-201ENSMUST00000196757 77 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm42506-201ENSMUST00000202009 150 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm43976-201ENSMUST00000203637 235 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm44687-201ENSMUST00000204975 235 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Cdc40Q9DC48 Gm23836-201ENSMUST00000104434 129 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Gm22565-201ENSMUST00000175540 69 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Gm20118-201ENSMUST00000187207 162 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Gm37399-201ENSMUST00000195224 416 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.93□□□□□ -2.26
Cdc40Q9DC48 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Gm24966-201ENSMUST00000082443 79 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Gm23625-201ENSMUST00000082457 100 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Gm25128-201ENSMUST00000083339 76 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Mir22-201ENSMUST00000083595 95 ntBASIC0.93□□□□□ -2.26
Cdc40Q9DC48 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm22545-201ENSMUST00000104350 132 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm22477-201ENSMUST00000122569 316 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm22215-201ENSMUST00000157558 96 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm27640-201ENSMUST00000184580 147 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm44149-201ENSMUST00000204256 226 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm5023-201ENSMUST00000217442 587 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.92□□□□□ -2.26
Cdc40Q9DC48 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm25506-201ENSMUST00000104339 70 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm25781-201ENSMUST00000122527 84 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm24808-201ENSMUST00000157993 118 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm23759-201ENSMUST00000158351 268 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Mir3061-201ENSMUST00000175129 91 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Mir5104-201ENSMUST00000175319 94 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm23419-201ENSMUST00000175523 84 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm42719-201ENSMUST00000197393 355 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm43898-201ENSMUST00000204456 424 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm26329-201ENSMUST00000093723 110 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.91□□□□□ -2.26
Cdc40Q9DC48 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.9□□□□□ -2.26
Cdc40Q9DC48 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Cdc40Q9DC48 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 Gm23106-201ENSMUST00000157554 101 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.9□□□□□ -2.27
Cdc40Q9DC48 Mir6380-201ENSMUST00000184334 81 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 Gm23299-201ENSMUST00000082708 79 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 Gm25929-201ENSMUST00000082784 107 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 Rny1-201ENSMUST00000083767 112 ntBASIC0.9□□□□□ -2.27
Cdc40Q9DC48 Gm24283-201ENSMUST00000104233 107 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm12785-201ENSMUST00000122052 172 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm24630-201ENSMUST00000122768 106 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm16358-201ENSMUST00000146046 210 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm25970-201ENSMUST00000157165 86 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm22403-201ENSMUST00000174919 84 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Mir7093-201ENSMUST00000184195 101 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Mir6985-201ENSMUST00000184641 61 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm29229-201ENSMUST00000188874 323 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm43472-201ENSMUST00000200175 154 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm24038-201ENSMUST00000082872 159 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm24261-201ENSMUST00000083744 104 ntBASIC0.89□□□□□ -2.27
Cdc40Q9DC48 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm22709-201ENSMUST00000116893 111 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm23893-201ENSMUST00000158106 134 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm26400-201ENSMUST00000175012 85 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Mir6540-201ENSMUST00000184886 108 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm37713-201ENSMUST00000191746 198 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm38274-201ENSMUST00000195689 148 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm25078-201ENSMUST00000082530 107 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm24042-201ENSMUST00000083114 103 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm25683-201ENSMUST00000083940 131 ntBASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Cdc40Q9DC48 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Cdc40Q9DC48 Gm23013-201ENSMUST00000104146 106 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms