Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm22502-201ENSMUST00000082488 107 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm22977-201ENSMUST00000082615 107 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm24149-201ENSMUST00000082757 107 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm24037-201ENSMUST00000082871 180 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm14980-201ENSMUST00000121247 736 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25544-201ENSMUST00000122676 120 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm22279-201ENSMUST00000157200 93 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm37997-201ENSMUST00000193515 267 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm10264-201ENSMUST00000220589 429 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25851-201ENSMUST00000082794 107 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25513-201ENSMUST00000083861 162 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm23041-201ENSMUST00000083868 106 ntBASIC0.68□□□□□ -2.3
Ccdc3Q9D6Y1 Gm12225-201ENSMUST00000117995 298 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm11859-201ENSMUST00000118099 455 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25161-201ENSMUST00000158913 132 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Cfap61-214ENSMUST00000167179 183 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm17067-202ENSMUST00000180131 123 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm26200-201ENSMUST00000180273 79 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm27539-201ENSMUST00000184971 224 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm37713-201ENSMUST00000191746 198 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm23614-201ENSMUST00000082598 107 ntBASIC0.67□□□□□ -2.3
Ccdc3Q9D6Y1 Gm12143-201ENSMUST00000119666 332 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25805-201ENSMUST00000122788 108 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm22791-201ENSMUST00000157232 145 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25884-201ENSMUST00000157782 62 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm22515-201ENSMUST00000158273 305 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm23114-201ENSMUST00000158478 117 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm22431-201ENSMUST00000158545 107 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Mir6346-201ENSMUST00000183982 81 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm34015-201ENSMUST00000194908 451 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm36953-201ENSMUST00000195295 268 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm43220-201ENSMUST00000199299 282 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm44010-201ENSMUST00000204432 331 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm43898-201ENSMUST00000204456 424 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm45704-201ENSMUST00000212582 403 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Mir155-201ENSMUST00000083463 65 ntBASIC0.66□□□□□ -2.3
Ccdc3Q9D6Y1 Gm12433-201ENSMUST00000119659 255 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22199-201ENSMUST00000122660 126 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm25909-201ENSMUST00000157619 121 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24853-201ENSMUST00000158026 121 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm26968-201ENSMUST00000182894 481 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm27974-201ENSMUST00000183415 105 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm37337-201ENSMUST00000192601 993 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm44325-201ENSMUST00000196757 77 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm23055-201ENSMUST00000082805 94 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm3867-201ENSMUST00000086108 279 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.65□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22545-201ENSMUST00000104350 132 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm11522-201ENSMUST00000120533 176 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm22435-201ENSMUST00000158552 128 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm23660-201ENSMUST00000178362 79 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24799-201ENSMUST00000178431 79 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24088-201ENSMUST00000179100 79 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm27236-201ENSMUST00000184147 442 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm28661-201ENSMUST00000188231 681 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm29022-201ENSMUST00000190702 225 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm18291-201ENSMUST00000190791 301 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Gm33654-201ENSMUST00000221704 215 ntBASIC0.64□□□□□ -2.31
Ccdc3Q9D6Y1 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24401-201ENSMUST00000157868 91 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm26285-201ENSMUST00000177923 107 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm27410-201ENSMUST00000183851 115 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm44358-201ENSMUST00000196301 98 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24966-201ENSMUST00000082443 79 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm23622-201ENSMUST00000082460 107 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm24356-201ENSMUST00000082859 106 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm25789-201ENSMUST00000083294 76 ntBASIC0.63□□□□□ -2.31
Ccdc3Q9D6Y1 Gm25578-201ENSMUST00000083406 104 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 169.6 ms