Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Mir467g-201ENSMUST00000116906 120 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm6829-201ENSMUST00000119858 360 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm26479-201ENSMUST00000122620 106 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm23858-201ENSMUST00000158384 106 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm23141-201ENSMUST00000178682 94 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm26200-201ENSMUST00000180273 79 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm37763-201ENSMUST00000193445 120 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm45859-201ENSMUST00000212794 214 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm9795-201ENSMUST00000062156 693 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.75□□□□□ -2.13
Ccdc39Q9D5Y1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm23535-201ENSMUST00000157542 106 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm25664-201ENSMUST00000157697 107 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm25718-201ENSMUST00000158632 118 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm27540-201ENSMUST00000184950 187 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm28921-201ENSMUST00000190219 378 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm43993-201ENSMUST00000203972 247 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Gm24355-201ENSMUST00000082858 122 ntBASIC1.74□□□□□ -2.13
Ccdc39Q9D5Y1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm24116-201ENSMUST00000103975 107 ntBASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm17067-202ENSMUST00000180131 123 ntBASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm29167-201ENSMUST00000190024 377 ntBASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm26265-202ENSMUST00000196326 133 ntBASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ccdc39Q9D5Y1 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Gm12351-201ENSMUST00000118727 292 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Gm27579-201ENSMUST00000158113 63 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Gm7958-201ENSMUST00000178255 468 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Gm7950-201ENSMUST00000179633 468 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Gm28794-201ENSMUST00000185276 136 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Gm19901-201ENSMUST00000192191 495 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Rny1-201ENSMUST00000083767 112 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.72□□□□□ -2.13
Ccdc39Q9D5Y1 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Mir881-201ENSMUST00000104844 78 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23336-201ENSMUST00000117023 123 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm12797-201ENSMUST00000118645 273 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23982-201ENSMUST00000157141 106 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23967-201ENSMUST00000175062 78 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23267-201ENSMUST00000178490 132 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm20144-201ENSMUST00000203031 165 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24977-201ENSMUST00000083106 163 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23039-201ENSMUST00000083870 161 ntBASIC1.71□□□□□ -2.14
Ccdc39Q9D5Y1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24079-201ENSMUST00000104352 132 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23836-201ENSMUST00000104434 129 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm14922-201ENSMUST00000121131 163 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22027-201ENSMUST00000122737 127 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm20477-201ENSMUST00000174028 280 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Mir1291-201ENSMUST00000199842 117 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm26379-202ENSMUST00000200225 132 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm45907-201ENSMUST00000213023 193 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm46997-201ENSMUST00000222108 217 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Snora34-201ENSMUST00000083402 138 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24163-201ENSMUST00000093660 132 ntBASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.7□□□□□ -2.14
Ccdc39Q9D5Y1 Gm23705-201ENSMUST00000104370 130 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm26049-201ENSMUST00000157313 108 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22883-201ENSMUST00000157376 106 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24729-201ENSMUST00000158225 137 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm26287-201ENSMUST00000158887 81 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24818-201ENSMUST00000175093 161 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22450-201ENSMUST00000179641 107 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm25473-201ENSMUST00000180191 107 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm27694-201ENSMUST00000184740 86 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm27545-201ENSMUST00000184755 202 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm28453-203ENSMUST00000187041 189 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm43220-201ENSMUST00000199299 282 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm10092-201ENSMUST00000077110 180 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm24856-201ENSMUST00000082809 107 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm22358-201ENSMUST00000082877 122 ntBASIC1.69□□□□□ -2.14
Ccdc39Q9D5Y1 Gm26071-201ENSMUST00000083261 107 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms