Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mir541-201ENSMUST00000102097 90 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm26015-201ENSMUST00000104402 125 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm13560-201ENSMUST00000121865 329 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm15214-201ENSMUST00000122155 470 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm24595-201ENSMUST00000122501 110 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm22279-201ENSMUST00000157200 93 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm25424-201ENSMUST00000157612 58 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm25333-201ENSMUST00000158035 246 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm25749-201ENSMUST00000175485 111 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm25935-201ENSMUST00000178746 107 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm27402-201ENSMUST00000183890 120 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Mir7081-201ENSMUST00000184490 75 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Mir6419-201ENSMUST00000184784 113 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Mir7217-201ENSMUST00000200304 62 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm45859-201ENSMUST00000212794 214 ntBASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Gm25825-201ENSMUST00000157091 124 ntBASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Gm23892-201ENSMUST00000158105 130 ntBASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Gm20630-201ENSMUST00000177387 551 ntBASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Gm23047-201ENSMUST00000177661 94 ntBASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ddx56Q9D0R4 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm12815-201ENSMUST00000121737 135 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm22553-201ENSMUST00000157797 295 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm37715-201ENSMUST00000193206 235 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm24151-201ENSMUST00000082758 141 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm23100-201ENSMUST00000083455 141 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm24261-201ENSMUST00000083744 104 ntBASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ddx56Q9D0R4 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Gm23466-201ENSMUST00000157133 106 ntBASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Gm23043-201ENSMUST00000157890 109 ntBASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Gm43587-201ENSMUST00000199590 204 ntBASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Gm24805-201ENSMUST00000082931 104 ntBASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
Ddx56Q9D0R4 Gm24068-201ENSMUST00000104513 132 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Gm25529-201ENSMUST00000104850 92 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Gm12721-201ENSMUST00000120621 268 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Gm24010-201ENSMUST00000157731 282 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Mir1967-201ENSMUST00000157789 82 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Gm24358-201ENSMUST00000158424 288 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Gm25035-201ENSMUST00000175414 77 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Gm27399-201ENSMUST00000184250 78 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Gm42719-201ENSMUST00000197393 355 ntBASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ddx56Q9D0R4 Mir223-201ENSMUST00000102112 110 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Gm16032-201ENSMUST00000118534 168 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Gm25884-201ENSMUST00000157782 62 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Gm23665-201ENSMUST00000158054 62 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Gm22159-201ENSMUST00000158412 130 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Gm26468-201ENSMUST00000158644 106 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Gm26024-201ENSMUST00000158657 322 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Mir3057-201ENSMUST00000175040 91 ntBASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ddx56Q9D0R4 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm13797-201ENSMUST00000121792 120 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm25720-201ENSMUST00000157503 105 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm24237-201ENSMUST00000157790 132 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm22433-201ENSMUST00000158550 142 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm2962-201ENSMUST00000159266 336 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm27511-201ENSMUST00000183502 127 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm33866-201ENSMUST00000196911 289 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm24522-201ENSMUST00000083964 108 ntBASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Ddx56Q9D0R4 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Snord70-201ENSMUST00000104157 87 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Mir669k-201ENSMUST00000177742 127 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Gm25673-201ENSMUST00000179957 127 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Gm27517-201ENSMUST00000184347 236 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Gm44477-201ENSMUST00000199661 110 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Snora69-201ENSMUST00000083708 131 ntBASIC2.21□□□□□ -2.06
Ddx56Q9D0R4 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm6897-201ENSMUST00000117714 138 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm14758-201ENSMUST00000119104 138 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm26026-201ENSMUST00000122726 123 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm28020-201ENSMUST00000157739 67 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm29613-201ENSMUST00000185846 313 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm29544-201ENSMUST00000188860 313 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm28808-201ENSMUST00000190978 313 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Ddx56Q9D0R4 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms