Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm28120-201ENSMUST00000188812 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28369-201ENSMUST00000188993 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28537-201ENSMUST00000189026 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28861-201ENSMUST00000189681 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29180-201ENSMUST00000190003 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29575-201ENSMUST00000190597 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29631-201ENSMUST00000191065 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28160-201ENSMUST00000191229 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29469-201ENSMUST00000191448 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm37129-201ENSMUST00000195791 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm42834-201ENSMUST00000196845 256 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm43220-201ENSMUST00000199299 282 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm22537-201ENSMUST00000158172 199 ntBASIC1.48□□□□□ -2.17
Smc1aQ9CU62 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.48□□□□□ -2.17
Smc1aQ9CU62 Gm26493-201ENSMUST00000083155 136 ntBASIC1.48□□□□□ -2.17
Smc1aQ9CU62 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm12143-201ENSMUST00000119666 332 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm22215-201ENSMUST00000157558 96 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm22663-201ENSMUST00000158721 102 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm24510-201ENSMUST00000174965 94 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm24818-201ENSMUST00000175093 161 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Mir7039-201ENSMUST00000183852 85 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm27540-201ENSMUST00000184950 187 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm28992-201ENSMUST00000190534 139 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm44483-201ENSMUST00000197203 97 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm25079-201ENSMUST00000082529 203 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm22294-201ENSMUST00000083308 104 ntBASIC1.47□□□□□ -2.17
Smc1aQ9CU62 Gm25274-201ENSMUST00000104296 135 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm24915-201ENSMUST00000157288 78 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm22814-201ENSMUST00000157452 104 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm23339-201ENSMUST00000158962 139 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm17919-201ENSMUST00000173344 312 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Mir7052-201ENSMUST00000184821 65 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm29661-201ENSMUST00000186781 315 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm29308-201ENSMUST00000188863 315 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm37693-201ENSMUST00000194562 234 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Gm26111-201ENSMUST00000083969 106 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Smc1aQ9CU62 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.46□□□□□ -2.18
Smc1aQ9CU62 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm22935-201ENSMUST00000103960 104 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Mir293-201ENSMUST00000104841 80 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm15002-201ENSMUST00000118406 452 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm24629-201ENSMUST00000122762 89 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm27640-201ENSMUST00000184580 147 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm28409-201ENSMUST00000187064 103 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm5010-201ENSMUST00000213131 260 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm23245-201ENSMUST00000083370 135 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm25512-201ENSMUST00000083863 107 ntBASIC1.45□□□□□ -2.18
Smc1aQ9CU62 Gm24116-201ENSMUST00000103975 107 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Gm22780-201ENSMUST00000104084 132 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Gm26301-201ENSMUST00000104813 95 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Gm13339-201ENSMUST00000120651 510 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Gm23083-201ENSMUST00000157851 116 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Mir5624-201ENSMUST00000176635 61 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Mir376a-201ENSMUST00000197584 68 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Gm44468-201ENSMUST00000199516 105 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Gm25038-201ENSMUST00000082928 130 ntBASIC1.44□□□□□ -2.18
Smc1aQ9CU62 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm24865-201ENSMUST00000103246 96 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Mir544-201ENSMUST00000103813 78 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm25170-201ENSMUST00000104191 129 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm12309-201ENSMUST00000119889 182 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm15214-201ENSMUST00000122155 470 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm22491-201ENSMUST00000157190 102 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm23760-201ENSMUST00000158350 116 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm25976-201ENSMUST00000158695 130 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm28008-201ENSMUST00000184021 186 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm27668-201ENSMUST00000184188 120 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm29512-201ENSMUST00000185544 315 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm34015-201ENSMUST00000194908 451 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm44858-201ENSMUST00000207360 154 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm45543-201ENSMUST00000209327 88 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm7240-201ENSMUST00000220769 664 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Gm24624-201ENSMUST00000082617 164 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Snord96a-201ENSMUST00000082791 81 ntBASIC1.43□□□□□ -2.18
Smc1aQ9CU62 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm23328-201ENSMUST00000157418 132 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm26038-201ENSMUST00000158151 106 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm23759-201ENSMUST00000158351 268 ntBASIC1.42□□□□□ -2.18
Smc1aQ9CU62 Gm22164-201ENSMUST00000158413 106 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 149.9 ms