Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Mir767-201ENSMUST00000103256 107 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm24283-201ENSMUST00000104233 107 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm11572-201ENSMUST00000119164 120 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm11792-201ENSMUST00000120640 168 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm26089-201ENSMUST00000157898 107 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm24192-201ENSMUST00000157978 145 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm26363-201ENSMUST00000158866 83 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm25450-201ENSMUST00000179144 107 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm24164-201ENSMUST00000093663 104 ntBASIC1.25□□□□□ -2.21
Ccdc43Q9CR29 Gm22780-201ENSMUST00000104084 132 ntBASIC1.24□□□□□ -2.21
Ccdc43Q9CR29 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ccdc43Q9CR29 Gm25069-201ENSMUST00000175238 86 ntBASIC1.24□□□□□ -2.21
Ccdc43Q9CR29 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.24□□□□□ -2.21
Ccdc43Q9CR29 Gm28794-201ENSMUST00000185276 136 ntBASIC1.24□□□□□ -2.21
Ccdc43Q9CR29 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.24□□□□□ -2.21
Ccdc43Q9CR29 Mir3087-201ENSMUST00000199405 56 ntBASIC1.24□□□□□ -2.21
Ccdc43Q9CR29 Gm25377-201ENSMUST00000104334 129 ntBASIC1.23□□□□□ -2.21
Ccdc43Q9CR29 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Ccdc43Q9CR29 Gm14761-201ENSMUST00000121363 262 ntBASIC1.23□□□□□ -2.21
Ccdc43Q9CR29 Gm11334-201ENSMUST00000121969 156 ntBASIC1.23□□□□□ -2.21
Ccdc43Q9CR29 Gm26004-201ENSMUST00000158804 116 ntBASIC1.23□□□□□ -2.21
Ccdc43Q9CR29 Gm29229-201ENSMUST00000188874 323 ntBASIC1.23□□□□□ -2.21
Ccdc43Q9CR29 Gm19777-201ENSMUST00000191940 358 ntBASIC1.23□□□□□ -2.21
Ccdc43Q9CR29 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 Gm14491-201ENSMUST00000121919 199 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 Gm25671-201ENSMUST00000178612 105 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 Gm23307-201ENSMUST00000179167 105 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 Gm25286-201ENSMUST00000179790 105 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 Gm29014-201ENSMUST00000191422 326 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 Gm23299-201ENSMUST00000082708 79 ntBASIC1.22□□□□□ -2.21
Ccdc43Q9CR29 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Gm24221-201ENSMUST00000158833 313 ntBASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Gm23267-201ENSMUST00000178490 132 ntBASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Gm27420-201ENSMUST00000183823 79 ntBASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Gm29022-201ENSMUST00000190702 225 ntBASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc43Q9CR29 Gm11794-201ENSMUST00000119446 237 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Gm15379-201ENSMUST00000121224 648 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Gm24630-201ENSMUST00000122768 106 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Gm23759-201ENSMUST00000158351 268 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Gm26029-201ENSMUST00000158659 132 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Gm25750-201ENSMUST00000175483 112 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Gm27419-201ENSMUST00000184576 109 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Mir6962-201ENSMUST00000199512 63 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Gm25937-201ENSMUST00000083912 107 ntBASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Ccdc43Q9CR29 Mir343-201ENSMUST00000102360 75 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Mir1904-201ENSMUST00000122702 80 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm14298-201ENSMUST00000139032 237 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm16356-201ENSMUST00000143300 169 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm23779-201ENSMUST00000157938 64 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Mir6381-201ENSMUST00000183426 87 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Mir7091-201ENSMUST00000184075 79 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm25636-201ENSMUST00000082666 133 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm22884-201ENSMUST00000083127 140 ntBASIC1.19□□□□□ -2.22
Ccdc43Q9CR29 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Gm24440-201ENSMUST00000157236 63 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Gm23474-201ENSMUST00000158884 75 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Gm24512-201ENSMUST00000174963 65 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Gm37338-201ENSMUST00000191986 127 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Gm9795-201ENSMUST00000062156 693 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Snord42a-201ENSMUST00000082606 65 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.18□□□□□ -2.22
Ccdc43Q9CR29 Gm11834-201ENSMUST00000122257 585 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm25781-201ENSMUST00000122527 84 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm23542-201ENSMUST00000158208 96 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm23262-201ENSMUST00000158323 168 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm22085-201ENSMUST00000158344 110 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm23967-201ENSMUST00000175062 78 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm23636-201ENSMUST00000175070 95 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm27326-201ENSMUST00000183504 95 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm23404-201ENSMUST00000082543 97 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm25697-201ENSMUST00000082902 98 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm25650-201ENSMUST00000083784 162 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.17□□□□□ -2.22
Ccdc43Q9CR29 Gm14307-201ENSMUST00000118930 291 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm14297-201ENSMUST00000129110 291 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm16362-201ENSMUST00000135189 214 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm22883-201ENSMUST00000157376 106 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm22802-201ENSMUST00000175621 89 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm44358-201ENSMUST00000196301 98 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Mir376a-201ENSMUST00000197584 68 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm44320-201ENSMUST00000199276 86 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm43976-201ENSMUST00000203637 235 ntBASIC1.16□□□□□ -2.22
Ccdc43Q9CR29 Gm43884-201ENSMUST00000204251 559 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 268.3 ms