Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm37801-201ENSMUST00000194754 274 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm43238-201ENSMUST00000196463 359 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm43976-201ENSMUST00000203637 235 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm44687-201ENSMUST00000204975 235 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm23055-201ENSMUST00000082805 94 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm25697-201ENSMUST00000082902 98 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Snord35a-201ENSMUST00000083884 90 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm22780-201ENSMUST00000104084 132 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm22551-201ENSMUST00000157795 103 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm23114-201ENSMUST00000158478 117 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm25450-201ENSMUST00000179144 107 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm36946-201ENSMUST00000192706 435 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm25079-201ENSMUST00000082529 203 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm25851-201ENSMUST00000082794 107 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm25650-201ENSMUST00000083784 162 ntBASIC0.7□□□□□ -2.3
RTRAFQ9CQE8 Gm26135-201ENSMUST00000101993 72 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Mir767-201ENSMUST00000103256 107 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm12512-201ENSMUST00000119620 217 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm24440-201ENSMUST00000157236 63 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm22598-201ENSMUST00000157600 127 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm25982-201ENSMUST00000157920 101 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm24192-201ENSMUST00000157978 145 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm26022-201ENSMUST00000158663 108 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm23182-201ENSMUST00000158688 135 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm24512-201ENSMUST00000174963 65 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm24818-201ENSMUST00000175093 161 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm23921-201ENSMUST00000175258 107 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Snord50b-201ENSMUST00000178497 72 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm23793-201ENSMUST00000179396 117 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm43624-201ENSMUST00000197368 180 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm44396-201ENSMUST00000199843 114 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Mir490-201ENSMUST00000093567 84 ntBASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
RTRAFQ9CQE8 Gm22556-201ENSMUST00000157803 100 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Gm23898-201ENSMUST00000158111 103 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Gm24221-201ENSMUST00000158833 313 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Mir3098-201ENSMUST00000175416 87 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Mir3103-201ENSMUST00000175474 67 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Gm26914-201ENSMUST00000182262 223 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Gm28921-201ENSMUST00000190219 378 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Gm22294-201ENSMUST00000083308 104 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.68□□□□□ -2.3
RTRAFQ9CQE8 Gm24116-201ENSMUST00000103975 107 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm15379-201ENSMUST00000121224 648 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm23542-201ENSMUST00000158208 96 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm23474-201ENSMUST00000158884 75 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm20386-201ENSMUST00000174010 132 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm24638-201ENSMUST00000179807 132 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm43427-201ENSMUST00000198188 331 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm43884-201ENSMUST00000204251 559 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm22884-201ENSMUST00000083127 140 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm24252-201ENSMUST00000083700 132 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Gm25627-201ENSMUST00000084003 153 ntBASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
RTRAFQ9CQE8 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm25832-201ENSMUST00000104140 130 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm15162-201ENSMUST00000119325 283 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm14491-201ENSMUST00000121919 199 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm11834-201ENSMUST00000122257 585 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm24630-201ENSMUST00000122768 106 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm25825-201ENSMUST00000157091 124 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm22883-201ENSMUST00000157376 106 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm24211-201ENSMUST00000158264 107 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm27420-201ENSMUST00000183823 79 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm27587-201ENSMUST00000185116 163 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm7654-201ENSMUST00000186738 683 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm38113-201ENSMUST00000193704 201 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm10264-201ENSMUST00000220589 429 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm23404-201ENSMUST00000082543 97 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm25204-201ENSMUST00000082843 106 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm22365-201ENSMUST00000093750 117 ntBASIC0.66□□□□□ -2.3
RTRAFQ9CQE8 Gm26080-201ENSMUST00000104069 131 ntBASIC0.65□□□□□ -2.31
RTRAFQ9CQE8 Gm15002-201ENSMUST00000118406 452 ntBASIC0.65□□□□□ -2.31
RTRAFQ9CQE8 Mir1951-201ENSMUST00000157981 89 ntBASIC0.65□□□□□ -2.31
RTRAFQ9CQE8 Gm20391-201ENSMUST00000174722 106 ntBASIC0.65□□□□□ -2.31
RTRAFQ9CQE8 Gm22114-201ENSMUST00000177756 107 ntBASIC0.65□□□□□ -2.31
RTRAFQ9CQE8 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.65□□□□□ -2.31
RTRAFQ9CQE8 Gm34783-201ENSMUST00000209159 303 ntBASIC0.65□□□□□ -2.31
RTRAFQ9CQE8 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms