Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.65□□□□□ -1.99
Trim8Q99PJ2 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.65□□□□□ -1.99
Trim8Q99PJ2 Gm25124-201ENSMUST00000083345 164 ntBASIC2.65□□□□□ -1.99
Trim8Q99PJ2 Snora34-201ENSMUST00000083402 138 ntBASIC2.65□□□□□ -1.99
Trim8Q99PJ2 Gm22681-201ENSMUST00000083853 106 ntBASIC2.65□□□□□ -1.99
Trim8Q99PJ2 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Trim8Q99PJ2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim8Q99PJ2 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.65□□□□□ -1.99
Trim8Q99PJ2 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm25407-201ENSMUST00000104102 134 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm26341-201ENSMUST00000104561 134 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm14588-201ENSMUST00000119895 172 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm23644-201ENSMUST00000157856 77 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm22212-201ENSMUST00000158096 106 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm27793-201ENSMUST00000183405 76 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm28282-201ENSMUST00000186072 186 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm37377-201ENSMUST00000191733 304 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm22249-201ENSMUST00000082485 136 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm25142-201ENSMUST00000082698 107 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm22421-201ENSMUST00000083058 107 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm23847-201ENSMUST00000083829 110 ntBASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Trim8Q99PJ2 Gm24436-201ENSMUST00000157889 302 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm24573-201ENSMUST00000175499 112 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm24926-201ENSMUST00000178053 79 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm22632-201ENSMUST00000178266 79 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm37081-201ENSMUST00000192034 196 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm38298-201ENSMUST00000193578 118 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm43602-201ENSMUST00000196772 300 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm25789-201ENSMUST00000083294 76 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.63□□□□□ -1.99
Trim8Q99PJ2 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm23911-201ENSMUST00000104596 134 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm22477-201ENSMUST00000122569 316 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm25393-201ENSMUST00000157336 285 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm25373-201ENSMUST00000158156 115 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm42807-201ENSMUST00000200141 329 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm44966-201ENSMUST00000208096 157 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm6109-201ENSMUST00000223297 348 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 Gm24929-201ENSMUST00000083403 139 ntBASIC2.62□□□□□ -1.99
Trim8Q99PJ2 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Mir450b-201ENSMUST00000102095 82 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 DQ267100-201ENSMUST00000122600 72 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm23434-201ENSMUST00000157179 100 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm23324-201ENSMUST00000157421 131 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Mir6376-201ENSMUST00000185149 131 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm34139-201ENSMUST00000196166 294 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm43993-201ENSMUST00000203972 247 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm30534-201ENSMUST00000217928 207 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm22248-201ENSMUST00000082482 150 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm24461-201ENSMUST00000082735 103 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Mir423-201ENSMUST00000083584 109 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm22576-201ENSMUST00000083733 104 ntBASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim8Q99PJ2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm16186-201ENSMUST00000120132 216 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm23858-201ENSMUST00000158384 106 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm25267-201ENSMUST00000158522 63 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm23182-201ENSMUST00000158688 135 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm17161-201ENSMUST00000169187 524 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm25464-201ENSMUST00000175481 107 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Mir7081-201ENSMUST00000184490 75 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm44482-201ENSMUST00000199232 103 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Gm25409-201ENSMUST00000083764 131 ntBASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Trim8Q99PJ2 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm25500-201ENSMUST00000104426 123 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Snord90-201ENSMUST00000104568 111 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm22193-201ENSMUST00000116868 76 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm23230-201ENSMUST00000157298 133 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm22221-201ENSMUST00000157362 103 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm22845-201ENSMUST00000157712 104 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm22553-201ENSMUST00000157797 295 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm26215-201ENSMUST00000158584 139 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm20613-201ENSMUST00000175828 345 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm27786-201ENSMUST00000184337 70 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm42844-201ENSMUST00000200355 112 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm22509-201ENSMUST00000082775 107 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 Gm26458-201ENSMUST00000082832 128 ntBASIC2.59□□□□□ -1.99
Trim8Q99PJ2 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms