Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm23355-201ENSMUST00000177614 107 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm23148-201ENSMUST00000180367 107 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Mir8119-201ENSMUST00000183371 129 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm23625-201ENSMUST00000082457 100 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm25258-201ENSMUST00000083049 107 ntBASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Sf3b1Q99NB9 Gm22785-201ENSMUST00000104087 132 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm23232-201ENSMUST00000157300 105 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm24504-201ENSMUST00000157679 100 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Mir3061-201ENSMUST00000175129 91 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm22929-201ENSMUST00000175517 107 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm25284-201ENSMUST00000180345 141 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Mir6381-201ENSMUST00000183426 87 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm27668-201ENSMUST00000184188 120 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm44473-201ENSMUST00000204039 152 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm45543-201ENSMUST00000209327 88 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Gm22294-201ENSMUST00000083308 104 ntBASIC1.15□□□□□ -2.22
Sf3b1Q99NB9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm14980-201ENSMUST00000121247 736 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm22215-201ENSMUST00000157558 96 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm24192-201ENSMUST00000157978 145 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm22945-201ENSMUST00000158557 157 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm25715-201ENSMUST00000158627 125 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm27540-201ENSMUST00000184950 187 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm28408-201ENSMUST00000191557 463 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm37801-201ENSMUST00000194754 274 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Gm23851-201ENSMUST00000083831 103 ntBASIC1.15□□□□□ -2.23
Sf3b1Q99NB9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Gm12785-201ENSMUST00000122052 172 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Mir1967-201ENSMUST00000157789 82 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Gm2962-201ENSMUST00000159266 336 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Mir5104-201ENSMUST00000175319 94 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Mir7663-201ENSMUST00000183950 61 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.14□□□□□ -2.23
Sf3b1Q99NB9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Gm22074-201ENSMUST00000158595 113 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Gm22129-201ENSMUST00000179034 107 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Gm23793-201ENSMUST00000179396 117 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Gm27419-201ENSMUST00000184576 109 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.13□□□□□ -2.23
Sf3b1Q99NB9 Gm26135-201ENSMUST00000101993 72 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm24588-201ENSMUST00000116696 83 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm15030-201ENSMUST00000119804 484 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm13518-201ENSMUST00000120018 233 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm26089-201ENSMUST00000157898 107 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm26194-201ENSMUST00000175036 71 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Snord50b-201ENSMUST00000178497 72 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm36946-201ENSMUST00000192706 435 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm25078-201ENSMUST00000082530 107 ntBASIC1.12□□□□□ -2.23
Sf3b1Q99NB9 Gm22003-201ENSMUST00000101885 107 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm24116-201ENSMUST00000103975 107 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm26074-201ENSMUST00000104063 129 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Snord71-201ENSMUST00000104361 85 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm22477-201ENSMUST00000122569 316 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm7958-201ENSMUST00000178255 468 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm7950-201ENSMUST00000179633 468 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm23410-201ENSMUST00000179967 107 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm22756-201ENSMUST00000180118 107 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm28661-201ENSMUST00000188231 681 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm42774-201ENSMUST00000198854 283 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm22306-201ENSMUST00000082692 107 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm22505-201ENSMUST00000082956 108 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm22363-201ENSMUST00000083100 108 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm23814-201ENSMUST00000083230 102 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm23095-201ENSMUST00000083446 107 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Mir448-201ENSMUST00000083516 112 ntBASIC1.11□□□□□ -2.23
Sf3b1Q99NB9 Gm11572-201ENSMUST00000119164 120 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm14846-201ENSMUST00000121868 216 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm22403-201ENSMUST00000174919 84 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm25450-201ENSMUST00000179144 107 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm7654-201ENSMUST00000186738 683 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm29229-201ENSMUST00000188874 323 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm37338-201ENSMUST00000191986 127 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Snord42a-201ENSMUST00000082606 65 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Gm23242-201ENSMUST00000083055 107 ntBASIC1.1□□□□□ -2.23
Sf3b1Q99NB9 Mir22-201ENSMUST00000083595 95 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms