Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm14491-201ENSMUST00000121919 199 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm26345-201ENSMUST00000157534 120 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm24770-201ENSMUST00000158505 92 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm26022-201ENSMUST00000158663 108 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm23864-201ENSMUST00000177607 107 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Mir6950-201ENSMUST00000184438 73 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm6109-201ENSMUST00000223297 348 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm22421-201ENSMUST00000083058 107 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm24453-201ENSMUST00000083346 76 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Mir222-201ENSMUST00000083537 79 ntBASIC2.07□□□□□ -2.08
Usp11Q99K46 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Usp11Q99K46 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm26077-201ENSMUST00000104064 123 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Snord19-201ENSMUST00000104609 76 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm25783-201ENSMUST00000122525 190 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm25321-201ENSMUST00000122558 102 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm26279-201ENSMUST00000157095 102 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm22217-201ENSMUST00000157556 313 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm23342-201ENSMUST00000158958 115 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm25996-201ENSMUST00000175393 117 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm27803-201ENSMUST00000183763 119 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm27443-201ENSMUST00000184660 98 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.06□□□□□ -2.08
Usp11Q99K46 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm26225-201ENSMUST00000082508 135 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm22744-201ENSMUST00000083444 65 ntBASIC2.06□□□□□ -2.08
Usp11Q99K46 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Mir466h-201ENSMUST00000104748 81 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.05□□□□□ -2.08
Usp11Q99K46 Mir1951-201ENSMUST00000157981 89 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm22731-201ENSMUST00000158086 94 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm22727-201ENSMUST00000158090 116 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm24837-201ENSMUST00000158683 81 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm23182-201ENSMUST00000158688 135 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm26379-202ENSMUST00000200225 132 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm45791-201ENSMUST00000212908 352 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm24457-201ENSMUST00000083196 105 ntBASIC2.05□□□□□ -2.08
Usp11Q99K46 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.04□□□□□ -2.08
Usp11Q99K46 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Usp11Q99K46 Gm22554-201ENSMUST00000157798 147 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 Gm22803-201ENSMUST00000158049 283 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 Gm25491-201ENSMUST00000158733 308 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 Gm23813-201ENSMUST00000175153 77 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Usp11Q99K46 Mir6406-201ENSMUST00000183592 120 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 Mir6995-201ENSMUST00000183658 71 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 Gm27585-201ENSMUST00000183717 199 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.04□□□□□ -2.08
Usp11Q99K46 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Usp11Q99K46 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm16328-201ENSMUST00000126985 196 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm23101-201ENSMUST00000157550 137 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm25834-201ENSMUST00000158916 101 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm24510-201ENSMUST00000174965 94 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Mir6901-201ENSMUST00000185062 62 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm29014-201ENSMUST00000191422 326 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm34139-201ENSMUST00000196166 294 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.03□□□□□ -2.08
Usp11Q99K46 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Usp11Q99K46 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm23950-201ENSMUST00000104026 129 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm23090-201ENSMUST00000177331 78 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm25935-201ENSMUST00000178746 107 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm23571-201ENSMUST00000180073 127 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Mir7017-201ENSMUST00000184894 62 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Mir3569-201ENSMUST00000185080 58 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm37557-201ENSMUST00000191640 139 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm7214-201ENSMUST00000222428 272 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm25401-201ENSMUST00000082975 106 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm24044-201ENSMUST00000083107 156 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Mir146-201ENSMUST00000083667 65 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm22866-201ENSMUST00000083947 177 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.02□□□□□ -2.09
Usp11Q99K46 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Usp11Q99K46 Gm13797-201ENSMUST00000121792 120 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 Gm23584-201ENSMUST00000157655 129 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 Gm26157-201ENSMUST00000158974 126 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 Gm27979-201ENSMUST00000185126 56 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 Gm35736-201ENSMUST00000203681 313 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.01□□□□□ -2.09
Usp11Q99K46 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.01□□□□□ -2.09
Usp11Q99K46 Gm24632-201ENSMUST00000122770 323 ntBASIC2□□□□□ -2.09
Usp11Q99K46 Gm23048-201ENSMUST00000157237 129 ntBASIC2□□□□□ -2.09
Usp11Q99K46 Gm23230-201ENSMUST00000157298 133 ntBASIC2□□□□□ -2.09
Usp11Q99K46 Gm22338-201ENSMUST00000157715 129 ntBASIC2□□□□□ -2.09
Usp11Q99K46 Rnu7-201ENSMUST00000158458 62 ntBASIC2□□□□□ -2.09
Usp11Q99K46 Gm16162-201ENSMUST00000162296 297 ntBASIC2□□□□□ -2.09
Usp11Q99K46 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 184.4 ms