Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm24632-201ENSMUST00000122770 323 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm25825-201ENSMUST00000157091 124 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm23983-201ENSMUST00000157142 114 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm22651-201ENSMUST00000157872 94 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm23190-201ENSMUST00000180307 64 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm29597-201ENSMUST00000188035 308 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm37807-201ENSMUST00000194310 190 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm45386-201ENSMUST00000210194 218 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm18502-201ENSMUST00000218679 199 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Snord7-201ENSMUST00000083781 97 ntBASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Pcdha1Q91Y21 Gm22731-201ENSMUST00000158086 94 ntBASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 Gm24082-201ENSMUST00000175175 83 ntBASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 Gm26337-201ENSMUST00000178000 79 ntBASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 Gm28169-201ENSMUST00000190342 345 ntBASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 Gm44326-201ENSMUST00000198226 101 ntBASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Pcdha1Q91Y21 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Mir682-201ENSMUST00000102281 96 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Rnu7-201ENSMUST00000158458 62 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm22500-201ENSMUST00000158982 99 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm22858-201ENSMUST00000174972 76 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm23090-201ENSMUST00000177331 78 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm22510-201ENSMUST00000179304 79 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm26336-201ENSMUST00000179449 79 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm26390-201ENSMUST00000179628 79 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm27527-201ENSMUST00000183903 99 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm27878-201ENSMUST00000184000 106 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm19257-201ENSMUST00000186121 183 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm43587-201ENSMUST00000199590 204 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Gm23722-201ENSMUST00000083002 130 ntBASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Pcdha1Q91Y21 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm22850-201ENSMUST00000157714 82 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm23043-201ENSMUST00000157890 109 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Mir3103-201ENSMUST00000175474 67 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm23922-201ENSMUST00000178792 79 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm24657-201ENSMUST00000180085 79 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm22996-201ENSMUST00000180236 79 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Mir6376-201ENSMUST00000185149 131 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm28900-201ENSMUST00000185232 156 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm29658-201ENSMUST00000185404 230 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm18346-201ENSMUST00000216782 325 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm24536-201ENSMUST00000083144 107 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.72□□□□□ -1.97
Pcdha1Q91Y21 Gm22373-201ENSMUST00000104584 89 ntBASIC2.71□□□□□ -1.98
Pcdha1Q91Y21 Gm23337-201ENSMUST00000158959 118 ntBASIC2.71□□□□□ -1.98
Pcdha1Q91Y21 Mir7050-201ENSMUST00000184636 60 ntBASIC2.71□□□□□ -1.98
Pcdha1Q91Y21 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.71□□□□□ -1.98
Pcdha1Q91Y21 Gm22622-201ENSMUST00000082870 129 ntBASIC2.71□□□□□ -1.98
Pcdha1Q91Y21 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Pcdha1Q91Y21 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Pcdha1Q91Y21 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm23320-201ENSMUST00000104462 127 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm24274-201ENSMUST00000116787 124 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm23470-201ENSMUST00000157129 120 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm22384-201ENSMUST00000158187 104 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Mir1927-201ENSMUST00000158579 109 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm9251-201ENSMUST00000197202 628 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm25136-201ENSMUST00000083253 115 ntBASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Pcdha1Q91Y21 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm26049-201ENSMUST00000157313 108 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Mir7014-201ENSMUST00000183853 63 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm25812-201ENSMUST00000082751 103 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm25814-201ENSMUST00000082754 107 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Snord118-201ENSMUST00000082965 135 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm26494-201ENSMUST00000083154 143 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm24493-201ENSMUST00000083805 143 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.69□□□□□ -1.98
Pcdha1Q91Y21 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms