Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
Nup35Q8R4R6 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.06□□□□□ -2.4
Nup35Q8R4R6 Gm44142-201ENSMUST00000203358 311 ntBASIC0.06□□□□□ -2.4
Nup35Q8R4R6 Gm44960-201ENSMUST00000207403 141 ntBASIC0.06□□□□□ -2.4
Nup35Q8R4R6 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.06□□□□□ -2.4
Nup35Q8R4R6 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.06□□□□□ -2.4
Nup35Q8R4R6 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.05□□□□□ -2.4
Nup35Q8R4R6 Gm6985-201ENSMUST00000121255 271 ntBASIC0.05□□□□□ -2.4
Nup35Q8R4R6 Gm16539-201ENSMUST00000160086 327 ntBASIC0.05□□□□□ -2.4
Nup35Q8R4R6 Gm22743-201ENSMUST00000083445 133 ntBASIC0.05□□□□□ -2.4
Nup35Q8R4R6 Gm14007-201ENSMUST00000118288 210 ntBASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Gm25952-201ENSMUST00000175329 74 ntBASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Gm24308-201ENSMUST00000177773 114 ntBASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Gm27659-201ENSMUST00000183472 98 ntBASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.04□□□□□ -2.4
Nup35Q8R4R6 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Snord95-201ENSMUST00000082846 68 ntBASIC0.04□□□□□ -2.4
Nup35Q8R4R6 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm24342-201ENSMUST00000103907 104 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm25416-201ENSMUST00000104221 107 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm23126-201ENSMUST00000104260 134 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm16358-201ENSMUST00000146046 210 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Scarna8-201ENSMUST00000158333 131 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm24005-201ENSMUST00000158459 296 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Mir3108-201ENSMUST00000175500 79 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm23523-201ENSMUST00000180190 107 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm26200-201ENSMUST00000180273 79 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm38261-201ENSMUST00000192608 316 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Gm45658-201ENSMUST00000209197 580 ntBASIC0.03□□□□□ -2.4
Nup35Q8R4R6 Mir709-201ENSMUST00000102190 88 ntBASIC0.02□□□□□ -2.41
Nup35Q8R4R6 Gm23761-201ENSMUST00000158347 104 ntBASIC0.02□□□□□ -2.41
Nup35Q8R4R6 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.02□□□□□ -2.41
Nup35Q8R4R6 Mir7077-201ENSMUST00000183991 57 ntBASIC0.02□□□□□ -2.41
Nup35Q8R4R6 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.02□□□□□ -2.41
Nup35Q8R4R6 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.02□□□□□ -2.41
Nup35Q8R4R6 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.02□□□□□ -2.41
Nup35Q8R4R6 Rny1-201ENSMUST00000083767 112 ntBASIC0.02□□□□□ -2.41
Nup35Q8R4R6 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Mir701-201ENSMUST00000102208 109 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm22591-201ENSMUST00000104243 106 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Mir654-201ENSMUST00000104787 84 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm23853-201ENSMUST00000158375 104 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm25718-201ENSMUST00000158632 118 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm27385-201ENSMUST00000184747 104 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm28343-201ENSMUST00000185386 112 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm44395-201ENSMUST00000197056 153 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm44052-201ENSMUST00000203382 396 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm44010-201ENSMUST00000204432 331 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm24355-201ENSMUST00000082858 122 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Mir500-201ENSMUST00000093600 92 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.01□□□□□ -2.41
Nup35Q8R4R6 Mir1197-201ENSMUST00000117037 120 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm26274-201ENSMUST00000157103 321 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm23411-201ENSMUST00000157988 62 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm23898-201ENSMUST00000158111 103 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm22200-201ENSMUST00000158614 67 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm25838-201ENSMUST00000158920 120 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm25949-201ENSMUST00000175333 114 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm23416-201ENSMUST00000175520 95 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm24618-201ENSMUST00000177718 94 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm23953-201ENSMUST00000178214 94 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm26332-201ENSMUST00000179813 94 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm22863-201ENSMUST00000180265 94 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm29014-201ENSMUST00000191422 326 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Nup35Q8R4R6 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 Gm24799-201ENSMUST00000178431 79 ntBASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 AC109212.1-201ENSMUST00000215561 427 ntBASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 Gm35558-203ENSMUST00000222264 204 ntBASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 Mir34a-201ENSMUST00000083559 102 ntBASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 Mir32-201ENSMUST00000083610 70 ntBASIC-0.01□□□□□ -2.41
Nup35Q8R4R6 Snord89-201ENSMUST00000104516 110 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm25318-201ENSMUST00000122554 314 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm23352-201ENSMUST00000158428 64 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm23025-201ENSMUST00000158769 111 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm27402-201ENSMUST00000183890 120 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Mir496b-201ENSMUST00000184935 113 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm28288-201ENSMUST00000191019 214 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Mir219b-201ENSMUST00000198317 65 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm8219-201ENSMUST00000218309 242 ntBASIC-0.02□□□□□ -2.41
Nup35Q8R4R6 Gm24208-201ENSMUST00000082783 135 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms