Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Mir465d-201ENSMUST00000196314 58 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.8□□□□□ -2.12
Nup88Q8CEC0 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm24283-201ENSMUST00000104233 107 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm12512-201ENSMUST00000119620 217 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm24847-201ENSMUST00000158032 108 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm23967-201ENSMUST00000175062 78 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm25730-201ENSMUST00000178753 165 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm27421-201ENSMUST00000184729 167 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm44384-201ENSMUST00000200208 114 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm43406-201ENSMUST00000200356 334 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm45616-201ENSMUST00000211711 319 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm5010-201ENSMUST00000213131 260 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.79□□□□□ -2.12
Nup88Q8CEC0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm11794-201ENSMUST00000119446 237 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm15115-201ENSMUST00000121145 264 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm23214-201ENSMUST00000122716 157 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm24440-201ENSMUST00000157236 63 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm24668-201ENSMUST00000158935 104 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm24512-201ENSMUST00000174963 65 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm25035-201ENSMUST00000175414 77 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm23267-201ENSMUST00000178490 132 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm22448-201ENSMUST00000179254 107 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.78□□□□□ -2.12
Nup88Q8CEC0 Gm22149-201ENSMUST00000104442 136 ntBASIC1.77□□□□□ -2.13
Nup88Q8CEC0 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.77□□□□□ -2.13
Nup88Q8CEC0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Nup88Q8CEC0 Gm44373-201ENSMUST00000196112 169 ntBASIC1.77□□□□□ -2.13
Nup88Q8CEC0 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Nup88Q8CEC0 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.77□□□□□ -2.13
Nup88Q8CEC0 Gm25357-201ENSMUST00000082745 72 ntBASIC1.77□□□□□ -2.13
Nup88Q8CEC0 Gm27521-201ENSMUST00000184022 64 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 Gm19123-201ENSMUST00000190716 651 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 Gm44962-201ENSMUST00000206460 279 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 Gm19572-201ENSMUST00000214326 338 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 Gm24966-201ENSMUST00000082443 79 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 Gm23100-201ENSMUST00000083455 141 ntBASIC1.76□□□□□ -2.13
Nup88Q8CEC0 Mir767-201ENSMUST00000103256 107 ntBASIC1.75□□□□□ -2.13
Nup88Q8CEC0 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.75□□□□□ -2.13
Nup88Q8CEC0 Gm45754-201ENSMUST00000212380 279 ntBASIC1.75□□□□□ -2.13
Nup88Q8CEC0 Gm46993-201ENSMUST00000220708 259 ntBASIC1.75□□□□□ -2.13
Nup88Q8CEC0 Gm10092-201ENSMUST00000077110 180 ntBASIC1.75□□□□□ -2.13
Nup88Q8CEC0 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Mir669l-201ENSMUST00000103771 98 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm12837-201ENSMUST00000120131 373 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm24895-201ENSMUST00000122742 74 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm22321-201ENSMUST00000157152 104 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm27326-201ENSMUST00000183504 95 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm27265-201ENSMUST00000183559 77 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm29308-201ENSMUST00000188863 315 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm44352-201ENSMUST00000196358 110 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm26497-201ENSMUST00000083146 107 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm25513-201ENSMUST00000083861 162 ntBASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Nup88Q8CEC0 Gm26135-201ENSMUST00000101993 72 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Mir223-201ENSMUST00000102112 110 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm25875-201ENSMUST00000104323 107 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm23492-201ENSMUST00000116837 115 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm14919-201ENSMUST00000120839 390 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm14922-201ENSMUST00000121131 163 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm24379-201ENSMUST00000122695 86 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Snord50b-201ENSMUST00000178497 72 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm20923-201ENSMUST00000190009 319 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm21088-201ENSMUST00000190875 316 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm25204-201ENSMUST00000082843 106 ntBASIC1.73□□□□□ -2.13
Nup88Q8CEC0 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Nup88Q8CEC0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm26479-201ENSMUST00000122620 106 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm22963-201ENSMUST00000157960 91 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm26402-201ENSMUST00000158499 113 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm24229-201ENSMUST00000158830 118 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm28537-201ENSMUST00000189026 315 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm29631-201ENSMUST00000191065 315 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm19855-201ENSMUST00000210145 249 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.72□□□□□ -2.13
Nup88Q8CEC0 Gm23982-201ENSMUST00000157141 106 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Gm23170-201ENSMUST00000157158 106 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Gm23640-201ENSMUST00000157860 104 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Gm17113-201ENSMUST00000170118 171 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Gm27905-201ENSMUST00000184005 207 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Gm43911-201ENSMUST00000203097 76 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.71□□□□□ -2.14
Nup88Q8CEC0 Gm45365-201ENSMUST00000209489 256 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 151.3 ms