Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm25199-201ENSMUST00000083095 104 ntBASIC2.34□□□□□ -2.03
Sh3rf2Q8BZT2 Snord104-201ENSMUST00000083192 70 ntBASIC2.34□□□□□ -2.03
Sh3rf2Q8BZT2 Gm25136-201ENSMUST00000083253 115 ntBASIC2.34□□□□□ -2.03
Sh3rf2Q8BZT2 Gm24929-201ENSMUST00000083403 139 ntBASIC2.34□□□□□ -2.03
Sh3rf2Q8BZT2 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.34□□□□□ -2.03
Sh3rf2Q8BZT2 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Sh3rf2Q8BZT2 Snord89-201ENSMUST00000104516 110 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm22193-201ENSMUST00000116868 76 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm11334-201ENSMUST00000121969 156 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23044-201ENSMUST00000157891 100 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm22011-201ENSMUST00000158790 123 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm27959-201ENSMUST00000185172 111 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm43587-201ENSMUST00000199590 204 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm44555-201ENSMUST00000209008 148 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm24616-201ENSMUST00000083274 139 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Gm10351-201ENSMUST00000087694 125 ntBASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Sh3rf2Q8BZT2 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Mir669b-201ENSMUST00000102172 97 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Gm22483-201ENSMUST00000157986 274 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23190-201ENSMUST00000180307 64 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23138-201ENSMUST00000083365 103 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23040-201ENSMUST00000083869 163 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Gm25628-201ENSMUST00000084002 105 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Mir488-201ENSMUST00000093595 109 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Sh3rf2Q8BZT2 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm22373-201ENSMUST00000104584 89 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Mir669d-201ENSMUST00000104644 121 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm24482-201ENSMUST00000117005 93 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm13433-201ENSMUST00000121701 240 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm22967-201ENSMUST00000157956 239 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm25267-201ENSMUST00000158522 63 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm9251-201ENSMUST00000197202 628 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm43676-201ENSMUST00000197532 540 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm43901-201ENSMUST00000203247 453 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm44459-201ENSMUST00000203926 160 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm26493-201ENSMUST00000083155 136 ntBASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Sh3rf2Q8BZT2 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm6025-201ENSMUST00000121517 201 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm14491-201ENSMUST00000121919 199 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm24480-201ENSMUST00000157442 103 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm22586-201ENSMUST00000157507 122 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23588-201ENSMUST00000157659 99 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm25464-201ENSMUST00000175481 107 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm22264-201ENSMUST00000178200 107 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm37377-201ENSMUST00000191733 304 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm45288-201ENSMUST00000210236 151 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm25815-201ENSMUST00000082755 107 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Gm26265-201ENSMUST00000083277 135 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23320-201ENSMUST00000104462 127 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23655-201ENSMUST00000122627 105 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Mir1291-201ENSMUST00000199842 117 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Snora34-201ENSMUST00000083402 138 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Gm24449-201ENSMUST00000083985 106 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Gm23947-201ENSMUST00000093636 107 ntBASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Gm25094-201ENSMUST00000103992 131 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Gm12941-201ENSMUST00000117934 220 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Gm6952-201ENSMUST00000118629 159 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Gm15214-201ENSMUST00000122155 470 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Mir28b-201ENSMUST00000175399 80 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Gm44564-201ENSMUST00000207985 180 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Sh3rf2Q8BZT2 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms