Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23080-201ENSMUST00000157846 103 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm24959-201ENSMUST00000157924 146 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Mir6386-201ENSMUST00000183558 104 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm26265-202ENSMUST00000196326 133 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm11351-202ENSMUST00000225724 478 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm23244-201ENSMUST00000083375 92 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm26327-201ENSMUST00000093724 111 ntBASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Usp40Q8BWR4 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm26421-201ENSMUST00000104279 132 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm11644-201ENSMUST00000119735 150 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm22850-201ENSMUST00000157714 82 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm26160-201ENSMUST00000158965 63 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm7592-201ENSMUST00000160674 627 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm24086-201ENSMUST00000175171 98 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm10298-201ENSMUST00000074801 265 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm25856-201ENSMUST00000082786 75 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.32□□□□□ -1.88
Usp40Q8BWR4 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm25485-201ENSMUST00000104120 132 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm23551-201ENSMUST00000116852 121 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm22071-201ENSMUST00000116857 83 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm26360-201ENSMUST00000158872 103 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm23504-201ENSMUST00000158988 95 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm28409-201ENSMUST00000187064 103 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm28992-201ENSMUST00000190534 139 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm43206-201ENSMUST00000197990 114 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Mir369-201ENSMUST00000083627 79 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.31□□□□□ -1.88
Usp40Q8BWR4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm26091-201ENSMUST00000122704 82 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm23535-201ENSMUST00000157542 106 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm24747-201ENSMUST00000157835 87 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm16289-201ENSMUST00000162079 183 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm37037-201ENSMUST00000194475 424 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm8031-201ENSMUST00000213430 626 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Gm25130-201ENSMUST00000082650 156 ntBASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp40Q8BWR4 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm24232-201ENSMUST00000104314 132 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm14536-201ENSMUST00000118324 138 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm15027-201ENSMUST00000120922 138 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm22558-201ENSMUST00000157326 95 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm26084-201ENSMUST00000157903 104 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm26405-201ENSMUST00000158495 100 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm15235-201ENSMUST00000200572 194 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Gm44524-201ENSMUST00000203899 271 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 AC126939.3-201ENSMUST00000226061 166 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Usp40Q8BWR4 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Mir344e-201ENSMUST00000104677 66 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Gm11460-201ENSMUST00000118200 361 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Gm25882-201ENSMUST00000157784 85 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Gm22011-201ENSMUST00000158790 123 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Mir3106-201ENSMUST00000175401 82 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Mir5136-201ENSMUST00000175573 76 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Mir6370-201ENSMUST00000183510 120 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usp40Q8BWR4 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.28□□□□□ -1.88
Usp40Q8BWR4 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Usp40Q8BWR4 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm16533-201ENSMUST00000140035 228 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Mir1951-201ENSMUST00000157981 89 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm22192-201ENSMUST00000175128 85 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm27527-201ENSMUST00000183903 99 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm27921-201ENSMUST00000183968 108 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm27668-201ENSMUST00000184188 120 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm22299-201ENSMUST00000082663 136 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm22507-201ENSMUST00000082773 160 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm25632-201ENSMUST00000083112 85 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm22827-201ENSMUST00000083766 107 ntBASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usp40Q8BWR4 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Gm13433-201ENSMUST00000121701 240 ntBASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Gm24436-201ENSMUST00000157889 302 ntBASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Gm27793-201ENSMUST00000183405 76 ntBASIC3.26□□□□□ -1.89
Usp40Q8BWR4 Gm18665-201ENSMUST00000189783 270 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 134.8 ms