Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm43960-201ENSMUST00000204249 5020 ntBASIC1□□□□□ -2.25
Ccdc40Q8BI79 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm25768-201ENSMUST00000158570 98 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm26004-201ENSMUST00000158804 116 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm25166-201ENSMUST00000158909 111 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm23267-201ENSMUST00000178490 132 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm26968-201ENSMUST00000182894 481 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm27540-201ENSMUST00000184950 187 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm19777-201ENSMUST00000191940 358 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm43472-201ENSMUST00000200175 154 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm44301-201ENSMUST00000200362 143 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm24164-201ENSMUST00000093663 104 ntBASIC0.99□□□□□ -2.25
Ccdc40Q8BI79 Gm24271-201ENSMUST00000102327 111 ntBASIC0.98□□□□□ -2.25
Ccdc40Q8BI79 Gm24401-201ENSMUST00000157868 91 ntBASIC0.98□□□□□ -2.25
Ccdc40Q8BI79 Gm43367-201ENSMUST00000199986 625 ntBASIC0.98□□□□□ -2.25
Ccdc40Q8BI79 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.98□□□□□ -2.25
Ccdc40Q8BI79 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.98□□□□□ -2.25
Ccdc40Q8BI79 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.98□□□□□ -2.25
Ccdc40Q8BI79 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Ccdc40Q8BI79 Gm11794-201ENSMUST00000119446 237 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm14761-201ENSMUST00000121363 262 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm23232-201ENSMUST00000157300 105 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm23542-201ENSMUST00000158208 96 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm25697-201ENSMUST00000082902 98 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm22704-201ENSMUST00000083027 137 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm22294-201ENSMUST00000083308 104 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Mir496a-201ENSMUST00000093627 79 ntBASIC0.97□□□□□ -2.25
Ccdc40Q8BI79 Gm26401-201ENSMUST00000158502 76 ntBASIC0.96□□□□□ -2.26
Ccdc40Q8BI79 Gm25284-201ENSMUST00000180345 141 ntBASIC0.96□□□□□ -2.26
Ccdc40Q8BI79 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.96□□□□□ -2.26
Ccdc40Q8BI79 Gm43250-201ENSMUST00000196536 273 ntBASIC0.96□□□□□ -2.26
Ccdc40Q8BI79 Gm10264-201ENSMUST00000220589 429 ntBASIC0.96□□□□□ -2.26
Ccdc40Q8BI79 Gm46993-201ENSMUST00000220708 259 ntBASIC0.96□□□□□ -2.26
Ccdc40Q8BI79 Gm24116-201ENSMUST00000103975 107 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Gm22544-201ENSMUST00000104349 127 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Gm20386-201ENSMUST00000174010 132 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Gm26400-201ENSMUST00000175012 85 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Gm24154-201ENSMUST00000175261 130 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Gm43238-201ENSMUST00000196463 359 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Gm26329-201ENSMUST00000093723 110 ntBASIC0.95□□□□□ -2.26
Ccdc40Q8BI79 Mir767-201ENSMUST00000103256 107 ntBASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Gm16032-201ENSMUST00000118534 168 ntBASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Gm43911-201ENSMUST00000203097 76 ntBASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Gm44921-201ENSMUST00000205290 301 ntBASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Gm25079-201ENSMUST00000082529 203 ntBASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Gm25636-201ENSMUST00000082666 133 ntBASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Ccdc40Q8BI79 Gm22689-201ENSMUST00000102452 110 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm24283-201ENSMUST00000104233 107 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm14491-201ENSMUST00000121919 199 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm22791-201ENSMUST00000157232 145 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm23329-201ENSMUST00000157415 108 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm22215-201ENSMUST00000157558 96 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm24942-201ENSMUST00000158328 114 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm24499-201ENSMUST00000158446 104 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm23355-201ENSMUST00000177614 107 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm23148-201ENSMUST00000180367 107 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Mir8090-201ENSMUST00000185078 136 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm29229-201ENSMUST00000188874 323 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm38323-201ENSMUST00000192450 210 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm44396-201ENSMUST00000199843 114 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm26056-201ENSMUST00000083043 104 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm25258-201ENSMUST00000083049 107 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Gm25578-201ENSMUST00000083406 104 ntBASIC0.93□□□□□ -2.26
Ccdc40Q8BI79 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm22011-201ENSMUST00000158790 123 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm7958-201ENSMUST00000178255 468 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm7950-201ENSMUST00000179633 468 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm27974-201ENSMUST00000183415 105 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm10105-201ENSMUST00000184601 270 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm42533-201ENSMUST00000196247 157 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Mir7661-201ENSMUST00000197023 61 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm24311-201ENSMUST00000082570 104 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm23851-201ENSMUST00000083831 103 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Mir490-201ENSMUST00000093567 84 ntBASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Ccdc40Q8BI79 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Gm15379-201ENSMUST00000121224 648 ntBASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Gm28489-201ENSMUST00000186655 316 ntBASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Gm28921-201ENSMUST00000190219 378 ntBASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Gm44320-201ENSMUST00000199276 86 ntBASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Gm25627-201ENSMUST00000084003 153 ntBASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.91□□□□□ -2.26
Ccdc40Q8BI79 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms