Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm26914-201ENSMUST00000182262 223 ntBASIC0.67□□□□□ -2.3
Clrn3Q8BHH8 Gm43406-201ENSMUST00000200356 334 ntBASIC0.67□□□□□ -2.3
Clrn3Q8BHH8 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.67□□□□□ -2.3
Clrn3Q8BHH8 Gm23377-201ENSMUST00000082943 126 ntBASIC0.67□□□□□ -2.3
Clrn3Q8BHH8 Gm3867-201ENSMUST00000086108 279 ntBASIC0.67□□□□□ -2.3
Clrn3Q8BHH8 Gm24163-201ENSMUST00000093660 132 ntBASIC0.67□□□□□ -2.3
Clrn3Q8BHH8 Gm26135-201ENSMUST00000101993 72 ntBASIC0.66□□□□□ -2.3
Clrn3Q8BHH8 Gm16032-201ENSMUST00000118534 168 ntBASIC0.66□□□□□ -2.3
Clrn3Q8BHH8 Snord50b-201ENSMUST00000178497 72 ntBASIC0.66□□□□□ -2.3
Clrn3Q8BHH8 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Clrn3Q8BHH8 Gm24150-201ENSMUST00000082759 104 ntBASIC0.66□□□□□ -2.3
Clrn3Q8BHH8 Gm24037-201ENSMUST00000082871 180 ntBASIC0.66□□□□□ -2.3
Clrn3Q8BHH8 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.66□□□□□ -2.3
Clrn3Q8BHH8 Mir695-201ENSMUST00000102261 109 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm11572-201ENSMUST00000119164 120 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm25909-201ENSMUST00000157619 121 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm24853-201ENSMUST00000158026 121 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm23996-201ENSMUST00000158062 131 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm22802-201ENSMUST00000175621 89 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm9227-201ENSMUST00000194733 566 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Mir216a-201ENSMUST00000083605 72 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Gm26164-201ENSMUST00000083793 104 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Mir362-201ENSMUST00000093592 65 ntBASIC0.65□□□□□ -2.31
Clrn3Q8BHH8 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm26180-201ENSMUST00000179942 107 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm27974-201ENSMUST00000183415 105 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm27410-201ENSMUST00000183851 115 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm29013-201ENSMUST00000187431 237 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm29229-201ENSMUST00000188874 323 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm43250-201ENSMUST00000196536 273 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm44396-201ENSMUST00000199843 114 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm5023-201ENSMUST00000217442 587 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm22743-201ENSMUST00000083445 133 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Mir490-201ENSMUST00000093567 84 ntBASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.64□□□□□ -2.31
Clrn3Q8BHH8 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.63□□□□□ -2.31
Clrn3Q8BHH8 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.63□□□□□ -2.31
Clrn3Q8BHH8 Gm28921-201ENSMUST00000190219 378 ntBASIC0.63□□□□□ -2.31
Clrn3Q8BHH8 Gm18213-201ENSMUST00000207850 178 ntBASIC0.63□□□□□ -2.31
Clrn3Q8BHH8 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.63□□□□□ -2.31
Clrn3Q8BHH8 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.63□□□□□ -2.31
Clrn3Q8BHH8 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.63□□□□□ -2.31
Clrn3Q8BHH8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm24579-201ENSMUST00000103964 144 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm14491-201ENSMUST00000121919 199 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm26358-201ENSMUST00000158215 97 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Cfap61-214ENSMUST00000167179 183 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm29014-201ENSMUST00000191422 326 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm23627-201ENSMUST00000082459 107 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm22502-201ENSMUST00000082488 107 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm22977-201ENSMUST00000082615 107 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 Gm24149-201ENSMUST00000082757 107 ntBASIC0.62□□□□□ -2.31
Clrn3Q8BHH8 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.61□□□□□ -2.31
Clrn3Q8BHH8 Gm14568-201ENSMUST00000119321 294 ntBASIC0.61□□□□□ -2.31
Clrn3Q8BHH8 Gm27656-201ENSMUST00000185055 80 ntBASIC0.61□□□□□ -2.31
Clrn3Q8BHH8 Gm29490-201ENSMUST00000190923 342 ntBASIC0.61□□□□□ -2.31
Clrn3Q8BHH8 Gm25434-201ENSMUST00000158278 167 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Gm25284-201ENSMUST00000180345 141 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Gm20923-201ENSMUST00000190009 319 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Gm21088-201ENSMUST00000190875 316 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Gm28288-201ENSMUST00000191019 214 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Gm26379-202ENSMUST00000200225 132 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Gm45543-201ENSMUST00000209327 88 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Gm25697-201ENSMUST00000082902 98 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Mir32-201ENSMUST00000083610 70 ntBASIC0.6□□□□□ -2.31
Clrn3Q8BHH8 Mir767-201ENSMUST00000103256 107 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm16265-201ENSMUST00000134558 108 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm24747-201ENSMUST00000157835 87 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm23898-201ENSMUST00000158111 103 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm23921-201ENSMUST00000175258 107 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.59□□□□□ -2.31
Clrn3Q8BHH8 Gm16404-201ENSMUST00000177739 468 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms