Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm27369-201ENSMUST00000185182 71 ntBASIC2.17□□□□□ -2.06
Usp8Q80U87 Gm28344-201ENSMUST00000185704 279 ntBASIC2.17□□□□□ -2.06
Usp8Q80U87 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.17□□□□□ -2.06
Usp8Q80U87 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.17□□□□□ -2.06
Usp8Q80U87 Gm25895-201ENSMUST00000083714 100 ntBASIC2.17□□□□□ -2.06
Usp8Q80U87 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Usp8Q80U87 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm23578-201ENSMUST00000103943 104 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm22935-201ENSMUST00000103960 104 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm25961-201ENSMUST00000157174 135 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm22553-201ENSMUST00000157797 295 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm25711-201ENSMUST00000158633 128 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm17528-201ENSMUST00000171026 239 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm24390-201ENSMUST00000179578 62 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Mir721-201ENSMUST00000200230 88 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Gm46993-201ENSMUST00000220708 259 ntBASIC2.16□□□□□ -2.06
Usp8Q80U87 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.16□□□□□ -2.06
Usp8Q80U87 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Usp8Q80U87 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Usp8Q80U87 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm22093-201ENSMUST00000158980 111 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Mir669k-201ENSMUST00000177742 127 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm25673-201ENSMUST00000179957 127 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm27991-201ENSMUST00000184804 137 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm38183-201ENSMUST00000193189 205 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm5002-201ENSMUST00000207145 223 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm44966-201ENSMUST00000208096 157 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm45456-201ENSMUST00000210841 243 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm26175-201ENSMUST00000083794 131 ntBASIC2.15□□□□□ -2.07
Usp8Q80U87 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Usp8Q80U87 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm22674-201ENSMUST00000104413 131 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm22494-201ENSMUST00000104495 128 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm22051-201ENSMUST00000117002 127 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm20438-201ENSMUST00000174441 329 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm24510-201ENSMUST00000174965 94 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Mir6917-201ENSMUST00000184111 61 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm6003-201ENSMUST00000187903 463 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm43199-201ENSMUST00000200019 307 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.14□□□□□ -2.07
Usp8Q80U87 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm22704-201ENSMUST00000083027 137 ntBASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usp8Q80U87 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Usp8Q80U87 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Usp8Q80U87 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm22151-201ENSMUST00000116963 58 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm15214-201ENSMUST00000122155 470 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm23230-201ENSMUST00000157298 133 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm24106-201ENSMUST00000175498 127 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Mir7215-201ENSMUST00000200383 51 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Snora69-201ENSMUST00000083708 131 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm22866-201ENSMUST00000083947 177 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.13□□□□□ -2.07
Usp8Q80U87 Gm24049-201ENSMUST00000102409 100 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm14748-201ENSMUST00000119819 411 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm25428-201ENSMUST00000157608 114 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm22535-201ENSMUST00000158174 119 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm24770-201ENSMUST00000158505 92 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm18546-201ENSMUST00000197245 676 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Snord80-202ENSMUST00000199023 77 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Mir497-201ENSMUST00000200557 84 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm45013-201ENSMUST00000206883 178 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm25813-201ENSMUST00000082748 191 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Usp8Q80U87 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.12□□□□□ -2.07
Usp8Q80U87 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Usp8Q80U87 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Usp8Q80U87 Gm23990-201ENSMUST00000117031 117 ntBASIC2.11□□□□□ -2.07
Usp8Q80U87 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.11□□□□□ -2.07
Usp8Q80U87 Gm25491-201ENSMUST00000158733 308 ntBASIC2.11□□□□□ -2.07
Usp8Q80U87 Gm23194-201ENSMUST00000158813 105 ntBASIC2.11□□□□□ -2.07
Usp8Q80U87 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.11□□□□□ -2.07
Usp8Q80U87 Gm25402-201ENSMUST00000082966 131 ntBASIC2.11□□□□□ -2.07
Usp8Q80U87 Mir29c-201ENSMUST00000083614 88 ntBASIC2.11□□□□□ -2.07
Usp8Q80U87 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.1□□□□□ -2.07
Usp8Q80U87 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 Gm25985-201ENSMUST00000122677 107 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 Gm26412-201ENSMUST00000157666 55 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 Gm16162-201ENSMUST00000162296 297 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 Gm37377-201ENSMUST00000191733 304 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 Gm42807-201ENSMUST00000200141 329 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.1□□□□□ -2.07
Usp8Q80U87 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Gm26015-201ENSMUST00000104402 125 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Gm13560-201ENSMUST00000121865 329 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Gm24595-201ENSMUST00000122501 110 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Gm25599-201ENSMUST00000157816 103 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Gm24001-201ENSMUST00000158463 85 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Gm25267-201ENSMUST00000158522 63 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Mir6376-201ENSMUST00000185149 131 ntBASIC2.09□□□□□ -2.07
Usp8Q80U87 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms