Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm25796-201ENSMUST00000082645 163 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm25813-201ENSMUST00000082748 191 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm25513-201ENSMUST00000083861 162 ntBASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ubfd1Q78JW9 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm15861-201ENSMUST00000120979 339 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm13433-201ENSMUST00000121701 240 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm25390-201ENSMUST00000157341 103 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm23642-201ENSMUST00000157858 258 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm23854-201ENSMUST00000158378 108 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm25015-201ENSMUST00000158400 128 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm24769-201ENSMUST00000158506 129 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm25368-201ENSMUST00000158847 131 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm16326-201ENSMUST00000162843 414 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm27476-201ENSMUST00000183366 104 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm45508-201ENSMUST00000209298 299 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm24661-201ENSMUST00000083205 104 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Mir155-201ENSMUST00000083463 65 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Mir423-201ENSMUST00000083584 109 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm12080-201ENSMUST00000119821 1883 ntBASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ubfd1Q78JW9 Gm26154-201ENSMUST00000102339 96 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm26077-201ENSMUST00000104064 123 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm14838-201ENSMUST00000118913 248 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm13797-201ENSMUST00000121792 120 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm26280-201ENSMUST00000157096 101 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm22768-201ENSMUST00000158366 153 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm22093-201ENSMUST00000158980 111 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Gm27585-201ENSMUST00000183717 199 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.12□□□□□ -2.07
Ubfd1Q78JW9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm24098-201ENSMUST00000102075 109 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm25381-201ENSMUST00000102078 109 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm23011-201ENSMUST00000104148 132 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Snord19-201ENSMUST00000104609 76 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Mir293-201ENSMUST00000104841 80 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm14588-201ENSMUST00000119895 172 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm13588-201ENSMUST00000120026 135 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm15214-201ENSMUST00000122155 470 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm24237-201ENSMUST00000157790 132 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm25935-201ENSMUST00000178746 107 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Mir7009-201ENSMUST00000184519 64 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm37557-201ENSMUST00000191640 139 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm37746-201ENSMUST00000193249 198 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm33866-201ENSMUST00000196911 289 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Snord43-201ENSMUST00000199549 108 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm22744-201ENSMUST00000083444 65 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Mir301-201ENSMUST00000083655 86 ntBASIC2.11□□□□□ -2.07
Ubfd1Q78JW9 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Gm23390-201ENSMUST00000157393 106 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Gm22554-201ENSMUST00000157798 147 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Gm23194-201ENSMUST00000158813 105 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Mir3086-201ENSMUST00000175072 87 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Mir3069-201ENSMUST00000198802 65 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Gm44853-201ENSMUST00000209070 250 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Gm24313-201ENSMUST00000082561 133 ntBASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ubfd1Q78JW9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm25316-201ENSMUST00000116826 118 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm13801-201ENSMUST00000120750 160 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm24595-201ENSMUST00000122501 110 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm24851-201ENSMUST00000158028 103 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm22259-201ENSMUST00000178926 107 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Mir6388-201ENSMUST00000184417 75 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm29014-201ENSMUST00000191422 326 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm24412-201ENSMUST00000083426 109 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Mir322-201ENSMUST00000083484 95 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Mir222-201ENSMUST00000083537 79 ntBASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ubfd1Q78JW9 Gm25783-201ENSMUST00000122525 190 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm26279-201ENSMUST00000157095 102 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm26482-201ENSMUST00000158015 62 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm23548-201ENSMUST00000158963 106 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Mir6905-201ENSMUST00000184228 70 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm37693-201ENSMUST00000194562 234 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm45116-201ENSMUST00000207392 275 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm5010-201ENSMUST00000213131 260 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm25634-201ENSMUST00000082667 105 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Gm24044-201ENSMUST00000083107 156 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Mir384-201ENSMUST00000083565 88 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Mir146-201ENSMUST00000083667 65 ntBASIC2.08□□□□□ -2.08
Ubfd1Q78JW9 Mir151-201ENSMUST00000083678 68 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 145.1 ms