Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc88cQ6VGS5 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Ccdc88cQ6VGS5 Mir10b-201ENSMUST00000083566 68 ntBASIC1.11□□□□□ -2.23
Ccdc88cQ6VGS5 Mir32-201ENSMUST00000083610 70 ntBASIC1.11□□□□□ -2.23
Ccdc88cQ6VGS5 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Ccdc88cQ6VGS5 Gm22689-201ENSMUST00000102452 110 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm25875-201ENSMUST00000104323 107 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm11862-201ENSMUST00000119678 659 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm28016-201ENSMUST00000184594 196 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm20257-202ENSMUST00000188643 130 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm28921-201ENSMUST00000190219 378 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm37763-201ENSMUST00000193445 120 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm23100-201ENSMUST00000083455 141 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm23041-201ENSMUST00000083868 106 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Mir669g-201ENSMUST00000116809 123 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm25315-201ENSMUST00000116823 121 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm26405-201ENSMUST00000158495 100 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Snora24-201ENSMUST00000174989 130 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm25994-201ENSMUST00000175392 101 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm43914-201ENSMUST00000203592 594 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm45116-201ENSMUST00000207392 275 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Gm26314-201ENSMUST00000083891 107 ntBASIC1.1□□□□□ -2.23
Ccdc88cQ6VGS5 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Ccdc88cQ6VGS5 Gm24342-201ENSMUST00000103907 104 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm23013-201ENSMUST00000104146 106 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm13885-201ENSMUST00000117569 187 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm11786-201ENSMUST00000120799 155 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm22281-201ENSMUST00000157198 103 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm25059-201ENSMUST00000157367 117 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm23858-201ENSMUST00000158384 106 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Rnu7-201ENSMUST00000158458 62 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm27332-201ENSMUST00000184893 112 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm37801-201ENSMUST00000194754 274 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm26493-201ENSMUST00000083155 136 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.09□□□□□ -2.24
Ccdc88cQ6VGS5 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm26156-201ENSMUST00000116999 123 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm14803-201ENSMUST00000117163 361 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm25054-201ENSMUST00000157370 97 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm24388-201ENSMUST00000177872 107 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm29665-201ENSMUST00000191457 528 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm19901-201ENSMUST00000192191 495 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm23625-201ENSMUST00000082457 100 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm23759-201ENSMUST00000158351 268 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm23581-201ENSMUST00000158531 63 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm25615-201ENSMUST00000177836 94 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm24261-201ENSMUST00000083744 104 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.08□□□□□ -2.24
Ccdc88cQ6VGS5 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm25496-201ENSMUST00000104430 120 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm13711-201ENSMUST00000119708 453 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm27545-201ENSMUST00000184755 202 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Mir219b-201ENSMUST00000198317 65 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm10092-201ENSMUST00000077110 180 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm24625-201ENSMUST00000082622 130 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm22972-201ENSMUST00000083297 131 ntBASIC1.07□□□□□ -2.24
Ccdc88cQ6VGS5 Gm24865-201ENSMUST00000103246 96 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm22195-201ENSMUST00000116861 108 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm14837-201ENSMUST00000119688 206 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm24892-201ENSMUST00000122747 104 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm23535-201ENSMUST00000157542 106 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm22338-201ENSMUST00000157715 129 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm22113-201ENSMUST00000158343 104 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Mir28b-201ENSMUST00000175399 80 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm17067-202ENSMUST00000180131 123 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm27793-201ENSMUST00000183405 76 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm27419-201ENSMUST00000184576 109 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm22358-201ENSMUST00000082877 122 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm23679-201ENSMUST00000083161 119 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Gm25188-201ENSMUST00000083913 122 ntBASIC1.06□□□□□ -2.24
Ccdc88cQ6VGS5 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms