Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.36□□□□□ -2.03
Sp140Q6NSQ5 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.36□□□□□ -2.03
Sp140Q6NSQ5 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.36□□□□□ -2.03
Sp140Q6NSQ5 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sp140Q6NSQ5 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.36□□□□□ -2.03
Sp140Q6NSQ5 Mir344c-201ENSMUST00000103919 92 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Gm23803-201ENSMUST00000104610 132 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Gm26280-201ENSMUST00000157096 101 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Gm25071-201ENSMUST00000175232 70 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Gm44859-201ENSMUST00000207831 94 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Gm24313-201ENSMUST00000082561 133 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.35□□□□□ -2.03
Sp140Q6NSQ5 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 Gm22148-201ENSMUST00000104445 107 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 Gm16355-201ENSMUST00000128606 231 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 Gm24390-201ENSMUST00000179578 62 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 Gm19118-201ENSMUST00000222554 98 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 Gm26175-201ENSMUST00000083794 131 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 Gm22154-201ENSMUST00000083844 131 ntBASIC2.34□□□□□ -2.03
Sp140Q6NSQ5 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Sp140Q6NSQ5 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm24263-201ENSMUST00000104059 107 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm13560-201ENSMUST00000121865 329 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm24595-201ENSMUST00000122501 110 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm24937-201ENSMUST00000122597 134 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm23655-201ENSMUST00000122627 105 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm22557-201ENSMUST00000157804 102 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm22947-201ENSMUST00000158559 91 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm25711-201ENSMUST00000158633 128 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm24167-201ENSMUST00000177733 124 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Gm24028-201ENSMUST00000178991 124 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Sp140Q6NSQ5 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm6952-201ENSMUST00000118629 159 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm23665-201ENSMUST00000158054 62 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm25491-201ENSMUST00000158733 308 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm16546-201ENSMUST00000159442 355 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm16162-201ENSMUST00000162296 297 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm20438-201ENSMUST00000174441 329 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm37693-201ENSMUST00000194562 234 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm45791-201ENSMUST00000212908 352 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.32□□□□□ -2.04
Sp140Q6NSQ5 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm22151-201ENSMUST00000116963 58 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm13922-201ENSMUST00000119505 156 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm22554-201ENSMUST00000157798 147 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm24769-201ENSMUST00000158506 129 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm24676-201ENSMUST00000158758 75 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Mir7232-201ENSMUST00000197929 74 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Mir3069-201ENSMUST00000198802 65 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm25796-201ENSMUST00000082645 163 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm24661-201ENSMUST00000083205 104 ntBASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Sp140Q6NSQ5 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm11598-201ENSMUST00000119257 357 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm23391-201ENSMUST00000157579 104 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm24075-201ENSMUST00000158175 72 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm22381-201ENSMUST00000158186 107 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm22699-201ENSMUST00000175376 105 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm24304-201ENSMUST00000177635 107 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm37557-201ENSMUST00000191640 139 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm18546-201ENSMUST00000197245 676 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm22686-201ENSMUST00000082847 100 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm22866-201ENSMUST00000083947 177 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.3□□□□□ -2.04
Sp140Q6NSQ5 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 Mir1927-201ENSMUST00000158579 109 ntBASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 Gm28900-201ENSMUST00000185232 156 ntBASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 Gm24044-201ENSMUST00000083107 156 ntBASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 Mir29c-201ENSMUST00000083614 88 ntBASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Sp140Q6NSQ5 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.28□□□□□ -2.04
Sp140Q6NSQ5 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Sp140Q6NSQ5 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.28□□□□□ -2.04
Sp140Q6NSQ5 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.28□□□□□ -2.04
Sp140Q6NSQ5 Gm26403-201ENSMUST00000158500 105 ntBASIC2.28□□□□□ -2.04
Sp140Q6NSQ5 Gm25464-201ENSMUST00000175481 107 ntBASIC2.28□□□□□ -2.04
Sp140Q6NSQ5 Mir21b-201ENSMUST00000184317 108 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms