Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm26004-201ENSMUST00000158804 116 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trim27Q62158 Mir7241-201ENSMUST00000184532 64 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Gm37089-201ENSMUST00000195616 129 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Gm7240-201ENSMUST00000220769 664 ntBASIC1.71□□□□□ -2.14
Trim27Q62158 Mir653-201ENSMUST00000102402 85 ntBASIC1.7□□□□□ -2.14
Trim27Q62158 Gm13339-201ENSMUST00000120651 510 ntBASIC1.7□□□□□ -2.14
Trim27Q62158 Gm14846-201ENSMUST00000121868 216 ntBASIC1.7□□□□□ -2.14
Trim27Q62158 Gm23267-201ENSMUST00000178490 132 ntBASIC1.7□□□□□ -2.14
Trim27Q62158 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.7□□□□□ -2.14
Trim27Q62158 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.7□□□□□ -2.14
Trim27Q62158 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.7□□□□□ -2.14
Trim27Q62158 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trim27Q62158 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.69□□□□□ -2.14
Trim27Q62158 Gm23122-201ENSMUST00000157645 103 ntBASIC1.69□□□□□ -2.14
Trim27Q62158 Gm28016-201ENSMUST00000184594 196 ntBASIC1.69□□□□□ -2.14
Trim27Q62158 Gm42774-201ENSMUST00000198854 283 ntBASIC1.69□□□□□ -2.14
Trim27Q62158 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.69□□□□□ -2.14
Trim27Q62158 Gm24283-201ENSMUST00000104233 107 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 Gm24629-201ENSMUST00000122762 89 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.68□□□□□ -2.14
Trim27Q62158 Gm22883-201ENSMUST00000157376 106 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 Gm24677-201ENSMUST00000158755 150 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 Gm24366-201ENSMUST00000175383 86 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trim27Q62158 Mir6951-201ENSMUST00000183910 75 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 Gm24261-201ENSMUST00000083744 104 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 Gm25513-201ENSMUST00000083861 162 ntBASIC1.68□□□□□ -2.14
Trim27Q62158 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trim27Q62158 Gm25848-201ENSMUST00000116790 144 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Gm14491-201ENSMUST00000121919 199 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Gm22434-201ENSMUST00000158549 122 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Gm27265-201ENSMUST00000183559 77 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.67□□□□□ -2.14
Trim27Q62158 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Gm44468-201ENSMUST00000199516 105 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Gm45005-201ENSMUST00000206640 157 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Gm29818-201ENSMUST00000218070 165 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.67□□□□□ -2.14
Trim27Q62158 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.66□□□□□ -2.14
Trim27Q62158 Gm25509-201ENSMUST00000116985 106 ntBASIC1.66□□□□□ -2.14
Trim27Q62158 Gm22315-201ENSMUST00000158010 143 ntBASIC1.66□□□□□ -2.14
Trim27Q62158 Gm24902-201ENSMUST00000158126 123 ntBASIC1.66□□□□□ -2.14
Trim27Q62158 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Trim27Q62158 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.66□□□□□ -2.14
Trim27Q62158 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Trim27Q62158 Gm26080-201ENSMUST00000104069 131 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Gm15002-201ENSMUST00000118406 452 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Gm22321-201ENSMUST00000157152 104 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Gm25936-201ENSMUST00000179952 114 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Gm42719-201ENSMUST00000197393 355 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Mir376a-201ENSMUST00000197584 68 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Mir7227-201ENSMUST00000200408 59 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Mir155-201ENSMUST00000083463 65 ntBASIC1.65□□□□□ -2.15
Trim27Q62158 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trim27Q62158 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm23060-201ENSMUST00000102345 109 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm23492-201ENSMUST00000116837 115 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm24379-201ENSMUST00000122695 86 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm24440-201ENSMUST00000157236 63 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm24512-201ENSMUST00000174963 65 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm23967-201ENSMUST00000175062 78 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm29014-201ENSMUST00000191422 326 ntBASIC1.64□□□□□ -2.15
Trim27Q62158 Gm13725-201ENSMUST00000122139 207 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 Gm27723-201ENSMUST00000157398 63 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 Gm28409-201ENSMUST00000187064 103 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.63□□□□□ -2.15
Trim27Q62158 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 Gm22248-201ENSMUST00000082482 150 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 Mir211-201ENSMUST00000083651 106 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.63□□□□□ -2.15
Trim27Q62158 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Trim27Q62158 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Trim27Q62158 Gm23941-201ENSMUST00000101953 107 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm22149-201ENSMUST00000104442 136 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm15214-201ENSMUST00000122155 470 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm22279-201ENSMUST00000157200 93 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm26049-201ENSMUST00000157313 108 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm22448-201ENSMUST00000179254 107 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm26447-201ENSMUST00000082448 129 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm23406-201ENSMUST00000082537 122 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm25204-201ENSMUST00000082843 106 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm25038-201ENSMUST00000082928 130 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Gm24316-201ENSMUST00000083041 107 ntBASIC1.62□□□□□ -2.15
Trim27Q62158 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trim27Q62158 Gm25884-201ENSMUST00000157782 62 ntBASIC1.61□□□□□ -2.15
Trim27Q62158 Mir7063-201ENSMUST00000184158 91 ntBASIC1.61□□□□□ -2.15
Trim27Q62158 Gm19777-201ENSMUST00000191940 358 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms