Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Snord35a-201ENSMUST00000083884 90 ntBASIC0.74□□□□□ -2.29
Vsx2Q61412 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm11522-201ENSMUST00000120533 176 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm11334-201ENSMUST00000121969 156 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm23114-201ENSMUST00000158478 117 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm25750-201ENSMUST00000175483 112 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm45119-201ENSMUST00000207612 199 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.73□□□□□ -2.29
Vsx2Q61412 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm25650-201ENSMUST00000083784 162 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Gm3867-201ENSMUST00000086108 279 ntBASIC0.73□□□□□ -2.29
Vsx2Q61412 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm22199-201ENSMUST00000122660 126 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm22791-201ENSMUST00000157232 145 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm22447-201ENSMUST00000158155 92 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm23059-201ENSMUST00000158978 107 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm28661-201ENSMUST00000188231 681 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm44458-201ENSMUST00000196594 143 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm23721-201ENSMUST00000083005 107 ntBASIC0.72□□□□□ -2.29
Vsx2Q61412 Gm16358-201ENSMUST00000146046 210 ntBASIC0.71□□□□□ -2.3
Vsx2Q61412 Gm25901-201ENSMUST00000158494 130 ntBASIC0.71□□□□□ -2.3
Vsx2Q61412 Gm23355-201ENSMUST00000177614 107 ntBASIC0.71□□□□□ -2.3
Vsx2Q61412 Mir6985-201ENSMUST00000184641 61 ntBASIC0.71□□□□□ -2.3
Vsx2Q61412 Gm37337-201ENSMUST00000192601 993 ntBASIC0.71□□□□□ -2.3
Vsx2Q61412 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Vsx2Q61412 Gm23614-201ENSMUST00000082598 107 ntBASIC0.71□□□□□ -2.3
Vsx2Q61412 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Vsx2Q61412 Gm23142-201ENSMUST00000101848 105 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm26240-201ENSMUST00000101893 105 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm11794-201ENSMUST00000119446 237 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm22985-201ENSMUST00000122754 116 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.7□□□□□ -2.3
Vsx2Q61412 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm20386-201ENSMUST00000174010 132 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm7958-201ENSMUST00000178255 468 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm7950-201ENSMUST00000179633 468 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm27420-201ENSMUST00000183823 79 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm27410-201ENSMUST00000183851 115 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Gm43250-201ENSMUST00000196536 273 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Mir10b-201ENSMUST00000083566 68 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Mir32-201ENSMUST00000083610 70 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Rny1-201ENSMUST00000083767 112 ntBASIC0.7□□□□□ -2.3
Vsx2Q61412 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Vsx2Q61412 Gm24579-201ENSMUST00000103964 144 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Gm23232-201ENSMUST00000157300 105 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Gm26914-201ENSMUST00000182262 223 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Gm28921-201ENSMUST00000190219 378 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Gm23735-201ENSMUST00000082551 134 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Gm25697-201ENSMUST00000082902 98 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Mir344-201ENSMUST00000083634 95 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.69□□□□□ -2.3
Vsx2Q61412 Gm24342-201ENSMUST00000103907 104 ntBASIC0.68□□□□□ -2.3
Vsx2Q61412 Gm25544-201ENSMUST00000122676 120 ntBASIC0.68□□□□□ -2.3
Vsx2Q61412 Gm24401-201ENSMUST00000157868 91 ntBASIC0.68□□□□□ -2.3
Vsx2Q61412 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.68□□□□□ -2.3
Vsx2Q61412 Gm19777-201ENSMUST00000191940 358 ntBASIC0.68□□□□□ -2.3
Vsx2Q61412 Gm38113-201ENSMUST00000193704 201 ntBASIC0.68□□□□□ -2.3
Vsx2Q61412 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.68□□□□□ -2.3
Vsx2Q61412 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Gm23013-201ENSMUST00000104146 106 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Gm11572-201ENSMUST00000119164 120 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Vsx2Q61412 Mir3109-201ENSMUST00000175301 88 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Gm24810-201ENSMUST00000175317 70 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Gm27545-201ENSMUST00000184755 202 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Gm44326-201ENSMUST00000198226 101 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.67□□□□□ -2.3
Vsx2Q61412 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.67□□□□□ -2.3
Vsx2Q61412 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm23991-201ENSMUST00000117033 93 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm25011-201ENSMUST00000158398 126 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm24499-201ENSMUST00000158446 104 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm26968-201ENSMUST00000182894 481 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.66□□□□□ -2.3
Vsx2Q61412 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm23055-201ENSMUST00000082805 94 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm22884-201ENSMUST00000083127 140 ntBASIC0.66□□□□□ -2.3
Vsx2Q61412 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.65□□□□□ -2.31
Vsx2Q61412 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Vsx2Q61412 Gm24283-201ENSMUST00000104233 107 ntBASIC0.65□□□□□ -2.31
Vsx2Q61412 Gm11248-201ENSMUST00000119568 201 ntBASIC0.65□□□□□ -2.31
Vsx2Q61412 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.65□□□□□ -2.31
Vsx2Q61412 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Vsx2Q61412 Gm23542-201ENSMUST00000158208 96 ntBASIC0.65□□□□□ -2.31
Vsx2Q61412 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms