Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm25321-201ENSMUST00000122558 102 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ift88Q61371 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.22□□□□□ -2.05
Ift88Q61371 Gm25371-201ENSMUST00000158162 101 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 Gm27803-201ENSMUST00000183763 119 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 Gm45116-201ENSMUST00000207392 275 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 Gm44938-201ENSMUST00000208614 427 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 Gm24457-201ENSMUST00000083196 105 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 Mir155-201ENSMUST00000083463 65 ntBASIC2.22□□□□□ -2.05
Ift88Q61371 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Ift88Q61371 Gm26015-201ENSMUST00000104402 125 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Gm3788-201ENSMUST00000119949 136 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Gm13801-201ENSMUST00000120750 160 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Gm24595-201ENSMUST00000122501 110 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Gm23854-201ENSMUST00000158378 108 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Gm22075-201ENSMUST00000158599 192 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Mir6917-201ENSMUST00000184111 61 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Gm29014-201ENSMUST00000191422 326 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Mir7217-201ENSMUST00000200304 62 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Gm25130-201ENSMUST00000082650 156 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Mir300-201ENSMUST00000083485 79 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Mir429-201ENSMUST00000083493 83 ntBASIC2.21□□□□□ -2.06
Ift88Q61371 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ift88Q61371 Gm26154-201ENSMUST00000102339 96 ntBASIC2.2□□□□□ -2.06
Ift88Q61371 Gm22553-201ENSMUST00000157797 295 ntBASIC2.2□□□□□ -2.06
Ift88Q61371 Gm22500-201ENSMUST00000158982 99 ntBASIC2.2□□□□□ -2.06
Ift88Q61371 Gm45002-201ENSMUST00000208045 120 ntBASIC2.2□□□□□ -2.06
Ift88Q61371 Gm26225-201ENSMUST00000082508 135 ntBASIC2.2□□□□□ -2.06
Ift88Q61371 Gm24762-201ENSMUST00000083689 104 ntBASIC2.2□□□□□ -2.06
Ift88Q61371 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ift88Q61371 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.2□□□□□ -2.06
Ift88Q61371 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ift88Q61371 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.2□□□□□ -2.06
Ift88Q61371 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.19□□□□□ -2.06
Ift88Q61371 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ift88Q61371 Mir466p-201ENSMUST00000103925 89 ntBASIC2.19□□□□□ -2.06
Ift88Q61371 Gm13560-201ENSMUST00000121865 329 ntBASIC2.19□□□□□ -2.06
Ift88Q61371 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.19□□□□□ -2.06
Ift88Q61371 Gm22727-201ENSMUST00000158090 116 ntBASIC2.19□□□□□ -2.06
Ift88Q61371 Gm27979-201ENSMUST00000185126 56 ntBASIC2.19□□□□□ -2.06
Ift88Q61371 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.19□□□□□ -2.06
Ift88Q61371 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.19□□□□□ -2.06
Ift88Q61371 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Ift88Q61371 Gm22767-201ENSMUST00000158365 165 ntBASIC2.18□□□□□ -2.06
Ift88Q61371 Gm23194-201ENSMUST00000158813 105 ntBASIC2.18□□□□□ -2.06
Ift88Q61371 Gm23548-201ENSMUST00000158963 106 ntBASIC2.18□□□□□ -2.06
Ift88Q61371 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.18□□□□□ -2.06
Ift88Q61371 Gm25142-201ENSMUST00000082698 107 ntBASIC2.18□□□□□ -2.06
Ift88Q61371 Gm22169-201ENSMUST00000083229 107 ntBASIC2.18□□□□□ -2.06
Ift88Q61371 Mir301-201ENSMUST00000083655 86 ntBASIC2.18□□□□□ -2.06
Ift88Q61371 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ift88Q61371 Gm24098-201ENSMUST00000102075 109 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Gm25381-201ENSMUST00000102078 109 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ift88Q61371 Gm24068-201ENSMUST00000104513 132 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Mir3092-201ENSMUST00000174954 96 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Gm23813-201ENSMUST00000175153 77 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Gm27399-201ENSMUST00000184250 78 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Mir6950-201ENSMUST00000184438 73 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Gm5010-201ENSMUST00000213131 260 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.17□□□□□ -2.06
Ift88Q61371 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Snord82-201ENSMUST00000082889 70 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Gm23461-201ENSMUST00000083265 107 ntBASIC2.17□□□□□ -2.06
Ift88Q61371 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Gm23230-201ENSMUST00000157298 133 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Gm26345-201ENSMUST00000157534 120 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Gm25368-201ENSMUST00000158847 131 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Gm37693-201ENSMUST00000194562 234 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.16□□□□□ -2.06
Ift88Q61371 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Mir30d-201ENSMUST00000083503 82 ntBASIC2.16□□□□□ -2.06
Ift88Q61371 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ift88Q61371 Mir293-201ENSMUST00000104841 80 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Mir1195-201ENSMUST00000116818 98 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm12449-201ENSMUST00000117572 234 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm23665-201ENSMUST00000158054 62 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm25494-201ENSMUST00000158143 100 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm22768-201ENSMUST00000158366 153 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm24770-201ENSMUST00000158505 92 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm26214-201ENSMUST00000158581 107 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm28344-201ENSMUST00000185704 279 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm25813-201ENSMUST00000082748 191 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Gm25401-201ENSMUST00000082975 106 ntBASIC2.15□□□□□ -2.07
Ift88Q61371 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Ift88Q61371 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ift88Q61371 Mir6388-201ENSMUST00000184417 75 ntBASIC2.14□□□□□ -2.07
Ift88Q61371 Gm25357-201ENSMUST00000082745 72 ntBASIC2.14□□□□□ -2.07
Ift88Q61371 Gm24412-201ENSMUST00000083426 109 ntBASIC2.14□□□□□ -2.07
Ift88Q61371 Gm24698-201ENSMUST00000083883 130 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms