Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm22517-201ENSMUST00000158265 136 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm22989-201ENSMUST00000158313 86 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm22159-201ENSMUST00000158412 130 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm24837-201ENSMUST00000158683 81 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm25368-201ENSMUST00000158847 131 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm23005-201ENSMUST00000158950 136 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm29604-201ENSMUST00000187176 163 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm43563-201ENSMUST00000196761 198 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm36189-201ENSMUST00000204113 523 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm44564-201ENSMUST00000207985 180 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm24762-201ENSMUST00000083689 104 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Gm24164-201ENSMUST00000093663 104 ntBASIC2.29□□□□□ -2.04
CtcfQ61164 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CtcfQ61164 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CtcfQ61164 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
CtcfQ61164 Gm25938-201ENSMUST00000104139 166 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm25425-201ENSMUST00000157611 96 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm24900-201ENSMUST00000158128 134 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm24106-201ENSMUST00000175498 127 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm27285-201ENSMUST00000183875 127 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm26265-202ENSMUST00000196326 133 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm3724-201ENSMUST00000197957 349 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm7214-201ENSMUST00000222428 272 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm25081-201ENSMUST00000082534 108 ntBASIC2.28□□□□□ -2.04
CtcfQ61164 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CtcfQ61164 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
CtcfQ61164 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CtcfQ61164 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CtcfQ61164 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Gm23990-201ENSMUST00000117031 117 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Gm11786-201ENSMUST00000120799 155 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Gm24573-201ENSMUST00000175499 112 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CtcfQ61164 Gm25933-201ENSMUST00000178943 108 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Gm43749-201ENSMUST00000199345 352 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.27□□□□□ -2.05
CtcfQ61164 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Gm26126-201ENSMUST00000083188 164 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Mir30d-201ENSMUST00000083503 82 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Mir127-201ENSMUST00000093568 70 ntBASIC2.27□□□□□ -2.05
CtcfQ61164 Gm26018-201ENSMUST00000104406 128 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm12351-201ENSMUST00000118727 292 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm24480-201ENSMUST00000157442 103 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm22767-201ENSMUST00000158365 165 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm25012-201ENSMUST00000158396 164 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Mir669k-201ENSMUST00000177742 127 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm25673-201ENSMUST00000179957 127 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm27878-201ENSMUST00000184000 106 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm27979-201ENSMUST00000185126 56 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm42807-201ENSMUST00000200141 329 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm44666-201ENSMUST00000208544 391 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm25402-201ENSMUST00000082966 131 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Mir384-201ENSMUST00000083565 88 ntBASIC2.26□□□□□ -2.05
CtcfQ61164 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CtcfQ61164 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.25□□□□□ -2.05
CtcfQ61164 Gm25223-201ENSMUST00000158200 110 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Mir8119-201ENSMUST00000183371 129 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Mir7226-201ENSMUST00000184953 60 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Gm19901-201ENSMUST00000192191 495 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Mir6925-201ENSMUST00000197857 70 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Gm43993-201ENSMUST00000203972 247 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Gm5002-201ENSMUST00000207145 223 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Gm22299-201ENSMUST00000082663 136 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Snora19-201ENSMUST00000082962 132 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Gm23658-201ENSMUST00000083233 132 ntBASIC2.25□□□□□ -2.05
CtcfQ61164 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CtcfQ61164 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CtcfQ61164 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CtcfQ61164 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CtcfQ61164 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CtcfQ61164 Gm22713-201ENSMUST00000116895 130 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm6829-201ENSMUST00000119858 360 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm25424-201ENSMUST00000157612 58 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm22803-201ENSMUST00000158049 283 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm24177-201ENSMUST00000158927 131 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm7592-201ENSMUST00000160674 627 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm17113-201ENSMUST00000170118 171 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm25935-201ENSMUST00000178746 107 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Mir6997-201ENSMUST00000184313 71 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.24□□□□□ -2.05
CtcfQ61164 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.24□□□□□ -2.05
CtcfQ61164 Gm25788-201ENSMUST00000082721 131 ntBASIC2.24□□□□□ -2.05
CtcfQ61164 Mir767-201ENSMUST00000103256 107 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CtcfQ61164 Gm25915-201ENSMUST00000104265 126 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Gm23535-201ENSMUST00000157542 106 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Gm25599-201ENSMUST00000157816 103 ntBASIC2.23□□□□□ -2.05
CtcfQ61164 Gm25494-201ENSMUST00000158143 100 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms