Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm26914-201ENSMUST00000182262 223 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm27711-201ENSMUST00000183802 118 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm7654-201ENSMUST00000186738 683 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm29229-201ENSMUST00000188874 323 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm28408-201ENSMUST00000191557 463 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.12□□□□□ -2.23
Usf1Q61069 Gm44483-201ENSMUST00000197203 97 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.12□□□□□ -2.23
Usf1Q61069 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.12□□□□□ -2.23
Usf1Q61069 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm24038-201ENSMUST00000082872 159 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Mir211-201ENSMUST00000083651 106 ntBASIC1.12□□□□□ -2.23
Usf1Q61069 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Usf1Q61069 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm13967-201ENSMUST00000120404 380 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm12785-201ENSMUST00000122052 172 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.11□□□□□ -2.23
Usf1Q61069 Gm24915-201ENSMUST00000157288 78 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm22164-201ENSMUST00000158413 106 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Usf1Q61069 Gm22929-201ENSMUST00000175517 107 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm36946-201ENSMUST00000192706 435 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm43976-201ENSMUST00000203637 235 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm44687-201ENSMUST00000204975 235 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm23140-201ENSMUST00000082487 107 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm23055-201ENSMUST00000082805 94 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Gm25513-201ENSMUST00000083861 162 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Usf1Q61069 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.11□□□□□ -2.23
Usf1Q61069 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Usf1Q61069 Gm22279-201ENSMUST00000157200 93 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Gm26038-201ENSMUST00000158151 106 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Usf1Q61069 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Gm45543-201ENSMUST00000209327 88 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.1□□□□□ -2.23
Usf1Q61069 Gm23404-201ENSMUST00000082543 97 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Snord42a-201ENSMUST00000082606 65 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Gm25409-201ENSMUST00000083764 131 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Gm25937-201ENSMUST00000083912 107 ntBASIC1.1□□□□□ -2.23
Usf1Q61069 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Usf1Q61069 Gm25506-201ENSMUST00000104339 70 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Gm22085-201ENSMUST00000158344 110 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Gm23339-201ENSMUST00000158962 139 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Usf1Q61069 Gm27540-201ENSMUST00000184950 187 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Gm42719-201ENSMUST00000197393 355 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Gm44473-201ENSMUST00000204039 152 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Gm22294-201ENSMUST00000083308 104 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Mir10b-201ENSMUST00000083566 68 ntBASIC1.09□□□□□ -2.23
Usf1Q61069 Gm11572-201ENSMUST00000119164 120 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm22215-201ENSMUST00000157558 96 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm23779-201ENSMUST00000157938 64 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm22537-201ENSMUST00000158172 199 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Usf1Q61069 Gm7958-201ENSMUST00000178255 468 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm25450-201ENSMUST00000179144 107 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm7950-201ENSMUST00000179633 468 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm23186-201ENSMUST00000180078 107 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.08□□□□□ -2.24
Usf1Q61069 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm25078-201ENSMUST00000082530 107 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Snord96a-201ENSMUST00000082791 81 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Mir155-201ENSMUST00000083463 65 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.08□□□□□ -2.24
Usf1Q61069 Gm24116-201ENSMUST00000103975 107 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm23705-201ENSMUST00000104370 130 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm23277-201ENSMUST00000157914 136 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm22663-201ENSMUST00000158721 102 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm2962-201ENSMUST00000159266 336 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm25671-201ENSMUST00000178612 105 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm23307-201ENSMUST00000179167 105 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm25286-201ENSMUST00000179790 105 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Usf1Q61069 Gm28211-201ENSMUST00000190920 315 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm37338-201ENSMUST00000191986 127 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.07□□□□□ -2.24
Usf1Q61069 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm30155-201ENSMUST00000223458 339 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Gm22364-201ENSMUST00000083097 98 ntBASIC1.07□□□□□ -2.24
Usf1Q61069 Snord1a-201ENSMUST00000083160 74 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 146.5 ms