Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.55□□□□□ -2.5
Trav3-1Q5R1I8 Gm24345-201ENSMUST00000158706 124 ntBASIC-0.55□□□□□ -2.5
Trav3-1Q5R1I8 Gm24085-201ENSMUST00000175172 116 ntBASIC-0.55□□□□□ -2.5
Trav3-1Q5R1I8 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.55□□□□□ -2.5
Trav3-1Q5R1I8 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.55□□□□□ -2.5
Trav3-1Q5R1I8 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.55□□□□□ -2.5
Trav3-1Q5R1I8 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.55□□□□□ -2.5
Trav3-1Q5R1I8 Gm25377-201ENSMUST00000104334 129 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm25110-201ENSMUST00000116684 121 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm25775-201ENSMUST00000116716 121 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm24795-201ENSMUST00000116737 121 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm25171-201ENSMUST00000116926 121 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm25882-201ENSMUST00000157784 85 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm22466-201ENSMUST00000175278 69 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm28992-201ENSMUST00000190534 139 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm42805-201ENSMUST00000196158 276 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm44960-201ENSMUST00000207403 141 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm26314-201ENSMUST00000083891 107 ntBASIC-0.56□□□□□ -2.5
Trav3-1Q5R1I8 Gm24889-201ENSMUST00000104388 132 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm13804-201ENSMUST00000119552 172 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm28956-201ENSMUST00000189047 427 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 AC157654.1-201ENSMUST00000224130 820 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm25855-201ENSMUST00000082787 72 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Mir34a-201ENSMUST00000083559 102 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm23731-201ENSMUST00000083749 107 ntBASIC-0.57□□□□□ -2.5
Trav3-1Q5R1I8 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.58□□□□□ -2.5
Trav3-1Q5R1I8 Gm24306-201ENSMUST00000180229 79 ntBASIC-0.58□□□□□ -2.5
Trav3-1Q5R1I8 Gm26228-201ENSMUST00000082512 107 ntBASIC-0.58□□□□□ -2.5
Trav3-1Q5R1I8 Gm25518-201ENSMUST00000083864 107 ntBASIC-0.58□□□□□ -2.5
Trav3-1Q5R1I8 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.59□□□□□ -2.5
Trav3-1Q5R1I8 Gm27817-201ENSMUST00000184302 233 ntBASIC-0.59□□□□□ -2.5
Trav3-1Q5R1I8 Gm44052-201ENSMUST00000203382 396 ntBASIC-0.59□□□□□ -2.5
Trav3-1Q5R1I8 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.59□□□□□ -2.5
Trav3-1Q5R1I8 AC114916.1-201ENSMUST00000228465 494 ntBASIC-0.59□□□□□ -2.5
Trav3-1Q5R1I8 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
Trav3-1Q5R1I8 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Anp32-ps-201ENSMUST00000118265 388 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm11798-201ENSMUST00000119150 421 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm24547-201ENSMUST00000158649 149 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm27624-201ENSMUST00000185047 177 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm37641-201ENSMUST00000193837 239 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm43406-201ENSMUST00000200356 334 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm25789-201ENSMUST00000083294 76 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Gm25582-201ENSMUST00000083412 110 ntBASIC-0.6□□□□□ -2.51
Trav3-1Q5R1I8 Mir872-201ENSMUST00000104728 81 ntBASIC-0.61□□□□□ -2.51
Trav3-1Q5R1I8 Gm24409-201ENSMUST00000157881 152 ntBASIC-0.61□□□□□ -2.51
Trav3-1Q5R1I8 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.61□□□□□ -2.51
Trav3-1Q5R1I8 Gm22283-201ENSMUST00000082556 161 ntBASIC-0.61□□□□□ -2.51
Trav3-1Q5R1I8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC-0.62□□□□□ -2.51
Trav3-1Q5R1I8 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.62□□□□□ -2.51
Trav3-1Q5R1I8 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.62□□□□□ -2.51
Trav3-1Q5R1I8 Gm23725-201ENSMUST00000177876 107 ntBASIC-0.62□□□□□ -2.51
Trav3-1Q5R1I8 Mir195b-201ENSMUST00000184814 97 ntBASIC-0.62□□□□□ -2.51
Trav3-1Q5R1I8 Mir691-201ENSMUST00000199719 78 ntBASIC-0.62□□□□□ -2.51
Trav3-1Q5R1I8 AC192616.3-201ENSMUST00000220797 1124 ntBASIC-0.62□□□□□ -2.51
Trav3-1Q5R1I8 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm23126-201ENSMUST00000104260 134 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm16358-201ENSMUST00000146046 210 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm25670-201ENSMUST00000178423 107 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm26239-201ENSMUST00000178842 107 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm17067-202ENSMUST00000180131 123 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm28688-201ENSMUST00000187301 268 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm19777-201ENSMUST00000191940 358 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm17906-201ENSMUST00000202480 901 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm43944-201ENSMUST00000205220 120 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm24292-201ENSMUST00000082888 107 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm43885-201ENSMUST00000204928 2542 ntBASIC-0.63□□□□□ -2.51
Trav3-1Q5R1I8 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Gm25976-201ENSMUST00000158695 130 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Gm16307-201ENSMUST00000161269 210 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Gm24754-201ENSMUST00000177997 107 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.64□□□□□ -2.51
Trav3-1Q5R1I8 Mir743b-201ENSMUST00000104751 77 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm27490-201ENSMUST00000184754 128 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.65□□□□□ -2.51
Trav3-1Q5R1I8 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms