Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm22591-201ENSMUST00000104243 106 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Mir190b-201ENSMUST00000104803 80 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm20391-201ENSMUST00000174722 106 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm18417-201ENSMUST00000176564 648 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm26200-201ENSMUST00000180273 79 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm20144-201ENSMUST00000203031 165 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm44960-201ENSMUST00000207403 141 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm22809-201ENSMUST00000082743 156 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm25789-201ENSMUST00000083294 76 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm22743-201ENSMUST00000083445 133 ntBASIC0.11□□□□□ -2.39
Trav5d-4Q5R1F6 Gm11856-201ENSMUST00000118712 276 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Gm25718-201ENSMUST00000158632 118 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Gm27659-201ENSMUST00000183472 98 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Mir7079-201ENSMUST00000184697 69 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Gm44142-201ENSMUST00000203358 311 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Gm45541-201ENSMUST00000210443 54 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.1□□□□□ -2.39
Trav5d-4Q5R1F6 Gm22469-201ENSMUST00000104118 133 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24555-201ENSMUST00000104548 124 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24833-201ENSMUST00000116775 120 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Mir1197-201ENSMUST00000117037 120 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm14007-201ENSMUST00000118288 210 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23169-201ENSMUST00000157157 112 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm22631-201ENSMUST00000179656 94 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23523-201ENSMUST00000180190 107 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm44948-201ENSMUST00000209050 149 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Trav5d-4Q5R1F6 Gm22786-201ENSMUST00000104086 122 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Mir1b-201ENSMUST00000117012 122 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Gm6985-201ENSMUST00000121255 271 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24005-201ENSMUST00000158459 296 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Gm22431-201ENSMUST00000158545 107 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24308-201ENSMUST00000177773 114 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Gm27385-201ENSMUST00000184747 104 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24208-201ENSMUST00000082783 135 ntBASIC0.08□□□□□ -2.4
Trav5d-4Q5R1F6 Mir701-201ENSMUST00000102208 109 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Gm25496-201ENSMUST00000104430 120 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Gm16358-201ENSMUST00000146046 210 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23761-201ENSMUST00000158347 104 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24772-201ENSMUST00000158507 110 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Gm38261-201ENSMUST00000192608 316 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Gm44395-201ENSMUST00000197056 153 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Gm25627-201ENSMUST00000084003 153 ntBASIC0.07□□□□□ -2.4
Trav5d-4Q5R1F6 Mir654-201ENSMUST00000104787 84 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23783-201ENSMUST00000157941 102 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm25044-201ENSMUST00000158603 104 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm16539-201ENSMUST00000160086 327 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24618-201ENSMUST00000177718 94 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23953-201ENSMUST00000178214 94 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm26332-201ENSMUST00000179813 94 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm22863-201ENSMUST00000180265 94 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Mir496b-201ENSMUST00000184935 113 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Mir32-201ENSMUST00000083610 70 ntBASIC0.06□□□□□ -2.4
Trav5d-4Q5R1F6 Mir465c-2-201ENSMUST00000104757 81 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23411-201ENSMUST00000157988 62 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23898-201ENSMUST00000158111 103 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Gm25952-201ENSMUST00000175329 74 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Gm45616-201ENSMUST00000211711 319 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Gm24355-201ENSMUST00000082858 122 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Mir465c-1-201ENSMUST00000093560 81 ntBASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23352-201ENSMUST00000158428 64 ntBASIC0.04□□□□□ -2.4
Trav5d-4Q5R1F6 Gm25949-201ENSMUST00000175333 114 ntBASIC0.04□□□□□ -2.4
Trav5d-4Q5R1F6 Mir3108-201ENSMUST00000175500 79 ntBASIC0.04□□□□□ -2.4
Trav5d-4Q5R1F6 Zfp950-206ENSMUST00000178819 171 ntBASIC0.04□□□□□ -2.4
Trav5d-4Q5R1F6 Mir500-201ENSMUST00000093600 92 ntBASIC0.04□□□□□ -2.4
Trav5d-4Q5R1F6 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm25787-201ENSMUST00000104709 92 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm26274-201ENSMUST00000157103 321 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Scarna8-201ENSMUST00000158333 131 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23853-201ENSMUST00000158375 104 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm22200-201ENSMUST00000158614 67 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm23025-201ENSMUST00000158769 111 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm27402-201ENSMUST00000183890 120 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm27980-201ENSMUST00000184094 169 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm28343-201ENSMUST00000185386 112 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm45403-201ENSMUST00000209453 276 ntBASIC0.03□□□□□ -2.4
Trav5d-4Q5R1F6 Gm35558-203ENSMUST00000222264 204 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms