Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Mir340-201ENSMUST00000083483 98 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Mir224-201ENSMUST00000083608 82 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm25650-201ENSMUST00000083784 162 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm25207-201ENSMUST00000093745 107 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm23013-201ENSMUST00000104146 106 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm13729-201ENSMUST00000120328 406 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm23535-201ENSMUST00000157542 106 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm28288-201ENSMUST00000191019 214 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm45119-201ENSMUST00000207612 199 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm45815-201ENSMUST00000220241 146 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm46997-201ENSMUST00000222108 217 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm22685-201ENSMUST00000082848 106 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.66□□□□□ -2.3
Col27a1Q5QNQ9 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm23656-201ENSMUST00000122626 112 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm23169-201ENSMUST00000157157 112 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Mir5104-201ENSMUST00000175319 94 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm20874-201ENSMUST00000178356 663 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm24152-201ENSMUST00000082764 163 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.65□□□□□ -2.31
Col27a1Q5QNQ9 Gm24116-201ENSMUST00000103975 107 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm25781-201ENSMUST00000122527 84 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm26393-201ENSMUST00000157625 129 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm26401-201ENSMUST00000158502 76 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm29490-201ENSMUST00000190923 342 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm42622-201ENSMUST00000197229 355 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm24208-201ENSMUST00000082783 135 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Mir141-201ENSMUST00000083540 72 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Mir32-201ENSMUST00000083610 70 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm14846-201ENSMUST00000121868 216 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm25543-201ENSMUST00000122678 312 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm22279-201ENSMUST00000157200 93 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm24005-201ENSMUST00000158459 296 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm24221-201ENSMUST00000158833 313 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm24510-201ENSMUST00000174965 94 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Gm25513-201ENSMUST00000083861 162 ntBASIC0.64□□□□□ -2.31
Col27a1Q5QNQ9 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 Gm22555-201ENSMUST00000157801 62 ntBASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 Gm17052-201ENSMUST00000165496 289 ntBASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 Gm22403-201ENSMUST00000174919 84 ntBASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 Gm24308-201ENSMUST00000177773 114 ntBASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 Gm45402-201ENSMUST00000211796 223 ntBASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Col27a1Q5QNQ9 Gm14392-201ENSMUST00000120332 401 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm14922-201ENSMUST00000121131 163 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm14413-201ENSMUST00000122158 408 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm22074-201ENSMUST00000158595 113 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm25643-201ENSMUST00000158874 103 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm37693-201ENSMUST00000194562 234 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm25357-201ENSMUST00000082745 72 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm23731-201ENSMUST00000083749 107 ntBASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Col27a1Q5QNQ9 Gm22935-201ENSMUST00000103960 104 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm26474-201ENSMUST00000116762 122 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm9059-201ENSMUST00000118319 183 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm14937-201ENSMUST00000119709 208 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm23191-201ENSMUST00000179147 107 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm18291-201ENSMUST00000190791 301 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm44491-201ENSMUST00000196794 96 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm44465-201ENSMUST00000199536 114 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm43367-201ENSMUST00000199986 625 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm12748-201ENSMUST00000120763 504 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm23921-201ENSMUST00000175258 107 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm37399-201ENSMUST00000195224 416 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm45878-201ENSMUST00000211839 241 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Gm3867-201ENSMUST00000086108 279 ntBASIC0.61□□□□□ -2.31
Col27a1Q5QNQ9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Col27a1Q5QNQ9 Gm22544-201ENSMUST00000104349 127 ntBASIC0.6□□□□□ -2.31
Col27a1Q5QNQ9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.6□□□□□ -2.31
Col27a1Q5QNQ9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Col27a1Q5QNQ9 Gm23106-201ENSMUST00000157554 101 ntBASIC0.6□□□□□ -2.31
Col27a1Q5QNQ9 Gm25434-201ENSMUST00000158278 167 ntBASIC0.6□□□□□ -2.31
Col27a1Q5QNQ9 Gm20630-201ENSMUST00000177387 551 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms