Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm20613-201ENSMUST00000175828 345 ntBASIC5.68□□□□□ -1.5
Trim41Q5NCC3 Gm6801-201ENSMUST00000190697 339 ntBASIC5.68□□□□□ -1.5
Trim41Q5NCC3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC5.68□□□□□ -1.5
Trim41Q5NCC3 Gm24203-201ENSMUST00000082949 114 ntBASIC5.68□□□□□ -1.5
Trim41Q5NCC3 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim41Q5NCC3 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Gm23933-201ENSMUST00000178405 79 ntBASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Gm22638-201ENSMUST00000179674 107 ntBASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Gm5358-201ENSMUST00000212814 353 ntBASIC5.67□□□□□ -1.5
Trim41Q5NCC3 AC136457.1-201ENSMUST00000224195 156 ntBASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Gm6030-201ENSMUST00000078768 402 ntBASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Mir9-2-201ENSMUST00000083490 72 ntBASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim41Q5NCC3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Gm22451-201ENSMUST00000122803 151 ntBASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Mir5127-201ENSMUST00000175295 71 ntBASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Gm44057-201ENSMUST00000204547 96 ntBASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim41Q5NCC3 Gm25113-201ENSMUST00000157185 143 ntBASIC5.65□□□□□ -1.5
Trim41Q5NCC3 Gm20058-201ENSMUST00000186939 284 ntBASIC5.65□□□□□ -1.5
Trim41Q5NCC3 Gm38356-201ENSMUST00000194313 408 ntBASIC5.65□□□□□ -1.5
Trim41Q5NCC3 Gm22507-201ENSMUST00000082773 160 ntBASIC5.65□□□□□ -1.5
Trim41Q5NCC3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim41Q5NCC3 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Gm43875-201ENSMUST00000203319 2475 ntBASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Gm14674-201ENSMUST00000117816 342 ntBASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Gm24878-201ENSMUST00000158782 104 ntBASIC5.64□□□□□ -1.51
Trim41Q5NCC3 AC154552.7-201ENSMUST00000222824 156 ntBASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Gm15302-201ENSMUST00000117779 2630 ntBASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Gm42446-201ENSMUST00000199783 3284 ntBASIC5.64□□□□□ -1.51
Trim41Q5NCC3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim41Q5NCC3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC5.63□□□□□ -1.51
Trim41Q5NCC3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim41Q5NCC3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim41Q5NCC3 Gm37928-201ENSMUST00000193265 4131 ntBASIC5.63□□□□□ -1.51
Trim41Q5NCC3 Gm26423-201ENSMUST00000104277 128 ntBASIC5.62□□□□□ -1.51
Trim41Q5NCC3 Mir291a-201ENSMUST00000104815 82 ntBASIC5.62□□□□□ -1.51
Trim41Q5NCC3 Gm24913-201ENSMUST00000157286 107 ntBASIC5.62□□□□□ -1.51
Trim41Q5NCC3 Gm23223-201ENSMUST00000158119 127 ntBASIC5.62□□□□□ -1.51
Trim41Q5NCC3 Gm22516-201ENSMUST00000158266 124 ntBASIC5.62□□□□□ -1.51
Trim41Q5NCC3 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim41Q5NCC3 Gm25529-201ENSMUST00000104850 92 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Gm22770-201ENSMUST00000158368 67 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Gm22532-201ENSMUST00000158822 140 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Gm24816-201ENSMUST00000175311 151 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Mir3076-201ENSMUST00000175415 60 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Gm27893-201ENSMUST00000184408 194 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim41Q5NCC3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 AC124687.1-201ENSMUST00000221868 189 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim41Q5NCC3 mt-Ts2-201ENSMUST00000082416 59 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Gm3956-201ENSMUST00000164882 2560 ntBASIC5.61□□□□□ -1.51
Trim41Q5NCC3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim41Q5NCC3 Gm14709-201ENSMUST00000121225 304 ntBASIC5.6□□□□□ -1.51
Trim41Q5NCC3 Gm23043-201ENSMUST00000157890 109 ntBASIC5.6□□□□□ -1.51
Trim41Q5NCC3 n-R5s40-201ENSMUST00000082475 124 ntBASIC5.6□□□□□ -1.51
Trim41Q5NCC3 Gm25130-201ENSMUST00000082650 156 ntBASIC5.6□□□□□ -1.51
Trim41Q5NCC3 Mir34c-201ENSMUST00000083653 77 ntBASIC5.6□□□□□ -1.51
Trim41Q5NCC3 Gm45540-201ENSMUST00000209271 3606 ntBASIC5.6□□□□□ -1.51
Trim41Q5NCC3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Gm26074-201ENSMUST00000104063 129 ntBASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Gm23349-201ENSMUST00000158432 98 ntBASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Mir6386-201ENSMUST00000183558 104 ntBASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Gm38311-201ENSMUST00000192945 165 ntBASIC5.59□□□□□ -1.51
Trim41Q5NCC3 AC154296.1-201ENSMUST00000198150 67 ntBASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Gm42585-201ENSMUST00000198731 4020 ntBASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Trim41Q5NCC3 Gm18337-201ENSMUST00000219023 5762 ntBASIC5.59□□□□□ -1.52
Trim41Q5NCC3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Gm33962-201ENSMUST00000182643 2592 ntBASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Mir669d-201ENSMUST00000104644 121 ntBASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Gm22796-201ENSMUST00000157234 106 ntBASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC5.58□□□□□ -1.52
Trim41Q5NCC3 AC168062.3-201ENSMUST00000227025 165 ntBASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim41Q5NCC3 Gm24896-201ENSMUST00000122741 135 ntBASIC5.57□□□□□ -1.52
Trim41Q5NCC3 Gm23048-201ENSMUST00000157237 129 ntBASIC5.57□□□□□ -1.52
Trim41Q5NCC3 Mir3470b-201ENSMUST00000175563 126 ntBASIC5.57□□□□□ -1.52
Trim41Q5NCC3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC5.57□□□□□ -1.52
Trim41Q5NCC3 Gm22283-201ENSMUST00000082556 161 ntBASIC5.57□□□□□ -1.52
Trim41Q5NCC3 Gm43486-201ENSMUST00000196431 4339 ntBASIC5.57□□□□□ -1.52
Trim41Q5NCC3 Gm22545-201ENSMUST00000104350 132 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 200.2 ms