Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm24668-201ENSMUST00000158935 104 ntBASIC1.26□□□□□ -2.21
Usp28Q5I043 Gm28661-201ENSMUST00000188231 681 ntBASIC1.26□□□□□ -2.21
Usp28Q5I043 Gm45673-201ENSMUST00000210293 358 ntBASIC1.26□□□□□ -2.21
Usp28Q5I043 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Usp28Q5I043 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm24283-201ENSMUST00000104233 107 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm11794-201ENSMUST00000119446 237 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm22883-201ENSMUST00000157376 106 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm24501-201ENSMUST00000158452 62 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm27997-201ENSMUST00000184942 69 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm29665-201ENSMUST00000191457 528 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm23845-201ENSMUST00000083834 152 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm24164-201ENSMUST00000093663 104 ntBASIC1.25□□□□□ -2.21
Usp28Q5I043 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Usp28Q5I043 Gm11857-201ENSMUST00000119817 324 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.24□□□□□ -2.21
Usp28Q5I043 Gm22099-201ENSMUST00000157925 123 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Usp28Q5I043 Gm22242-201ENSMUST00000175224 118 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 Mir3098-201ENSMUST00000175416 87 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 Gm27421-201ENSMUST00000184729 167 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.24□□□□□ -2.21
Usp28Q5I043 Gm45616-201ENSMUST00000211711 319 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 Gm29818-201ENSMUST00000218070 165 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.24□□□□□ -2.21
Usp28Q5I043 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.24□□□□□ -2.21
Usp28Q5I043 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Usp28Q5I043 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
Usp28Q5I043 Mir293-201ENSMUST00000104841 80 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm13967-201ENSMUST00000120404 380 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm22479-201ENSMUST00000122566 81 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Mir1904-201ENSMUST00000122702 80 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm24076-201ENSMUST00000158179 94 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm23208-201ENSMUST00000158666 127 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm23289-201ENSMUST00000175615 108 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm27711-201ENSMUST00000183802 118 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm27517-201ENSMUST00000184347 236 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Mir3535-201ENSMUST00000197651 147 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.23□□□□□ -2.21
Usp28Q5I043 Mir22-201ENSMUST00000083595 95 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Gm25513-201ENSMUST00000083861 162 ntBASIC1.23□□□□□ -2.21
Usp28Q5I043 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Usp28Q5I043 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm23941-201ENSMUST00000101953 107 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm26339-201ENSMUST00000102368 99 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm25495-201ENSMUST00000104431 131 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm23907-201ENSMUST00000104595 189 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm13725-201ENSMUST00000122139 207 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm23214-201ENSMUST00000122716 157 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm24440-201ENSMUST00000157236 63 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm24677-201ENSMUST00000158755 150 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm24512-201ENSMUST00000174963 65 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm23406-201ENSMUST00000082537 122 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Gm24042-201ENSMUST00000083114 103 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Mir155-201ENSMUST00000083463 65 ntBASIC1.22□□□□□ -2.21
Usp28Q5I043 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Usp28Q5I043 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm12512-201ENSMUST00000119620 217 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm24229-201ENSMUST00000158830 118 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm25069-201ENSMUST00000175238 86 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm24366-201ENSMUST00000175383 86 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm7258-201ENSMUST00000179317 300 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm28016-201ENSMUST00000184594 196 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm28794-201ENSMUST00000185276 136 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.21□□□□□ -2.22
Usp28Q5I043 Mir7227-201ENSMUST00000200408 59 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm45005-201ENSMUST00000206640 157 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm23055-201ENSMUST00000082805 94 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm25793-201ENSMUST00000083287 107 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.21□□□□□ -2.22
Usp28Q5I043 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Usp28Q5I043 Mir653-201ENSMUST00000102402 85 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm27723-201ENSMUST00000157398 63 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm26029-201ENSMUST00000158659 132 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm37763-201ENSMUST00000193445 120 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm37801-201ENSMUST00000194754 274 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm42594-201ENSMUST00000199511 246 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm10092-201ENSMUST00000077110 180 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm24966-201ENSMUST00000082443 79 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Gm23345-201ENSMUST00000083817 150 ntBASIC1.2□□□□□ -2.22
Usp28Q5I043 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 141.3 ms