Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm22027-201ENSMUST00000122737 127 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.02□□□□□ -2.25
Shank3Q4ACU6 Gm22163-201ENSMUST00000158408 135 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 Gm20477-201ENSMUST00000174028 280 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 Gm43220-201ENSMUST00000199299 282 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 Gm23735-201ENSMUST00000082551 134 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 Gm24208-201ENSMUST00000082783 135 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.02□□□□□ -2.25
Shank3Q4ACU6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm24079-201ENSMUST00000104352 132 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Mir293-201ENSMUST00000104841 80 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Mir1197-201ENSMUST00000117037 120 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm25805-201ENSMUST00000122788 108 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm22559-201ENSMUST00000157329 134 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm24510-201ENSMUST00000174965 94 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm10105-201ENSMUST00000184601 270 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28110-201ENSMUST00000185782 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29057-201ENSMUST00000186468 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm7654-201ENSMUST00000186738 683 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28737-201ENSMUST00000186808 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29147-201ENSMUST00000186846 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29118-201ENSMUST00000186908 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28433-201ENSMUST00000187085 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29227-201ENSMUST00000187139 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28759-201ENSMUST00000187621 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28831-201ENSMUST00000187739 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29034-201ENSMUST00000188099 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28752-201ENSMUST00000188340 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28569-201ENSMUST00000188748 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28120-201ENSMUST00000188812 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28369-201ENSMUST00000188993 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28537-201ENSMUST00000189026 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28861-201ENSMUST00000189681 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28717-201ENSMUST00000189950 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29180-201ENSMUST00000190003 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29575-201ENSMUST00000190597 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29631-201ENSMUST00000191065 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm28160-201ENSMUST00000191229 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm29469-201ENSMUST00000191448 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm37129-201ENSMUST00000195791 315 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm30155-201ENSMUST00000223458 339 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm25929-201ENSMUST00000082784 107 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm23242-201ENSMUST00000083055 107 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm23142-201ENSMUST00000101848 105 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm26240-201ENSMUST00000101893 105 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm14980-201ENSMUST00000121247 736 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm23172-201ENSMUST00000157160 124 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm26405-201ENSMUST00000158495 100 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Mir3057-201ENSMUST00000175040 91 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm23412-201ENSMUST00000083017 107 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Mir340-201ENSMUST00000083483 98 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1.01□□□□□ -2.25
Shank3Q4ACU6 Gm23531-201ENSMUST00000104567 68 ntBASIC1□□□□□ -2.25
Shank3Q4ACU6 Mir1b-201ENSMUST00000117012 122 ntBASIC1□□□□□ -2.25
Shank3Q4ACU6 Gm27845-201ENSMUST00000184479 114 ntBASIC1□□□□□ -2.25
Shank3Q4ACU6 Gm38050-201ENSMUST00000191904 238 ntBASIC1□□□□□ -2.25
Shank3Q4ACU6 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1□□□□□ -2.25
Shank3Q4ACU6 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1□□□□□ -2.25
Shank3Q4ACU6 AC123709.1-201ENSMUST00000224848 345 ntBASIC1□□□□□ -2.25
Shank3Q4ACU6 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Shank3Q4ACU6 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1□□□□□ -2.25
Shank3Q4ACU6 Gm25937-201ENSMUST00000083912 107 ntBASIC1□□□□□ -2.25
Shank3Q4ACU6 Gm24668-201ENSMUST00000158935 104 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm23148-201ENSMUST00000180367 107 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm26914-201ENSMUST00000182262 223 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm27974-201ENSMUST00000183415 105 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm43035-201ENSMUST00000197626 517 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm23370-201ENSMUST00000199545 130 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm44473-201ENSMUST00000204039 152 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm46997-201ENSMUST00000222108 217 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm25258-201ENSMUST00000083049 107 ntBASIC0.99□□□□□ -2.25
Shank3Q4ACU6 Gm14674-201ENSMUST00000117816 342 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm14922-201ENSMUST00000121131 163 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm22085-201ENSMUST00000158344 110 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm25671-201ENSMUST00000178612 105 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm23307-201ENSMUST00000179167 105 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm25286-201ENSMUST00000179790 105 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm27517-201ENSMUST00000184347 236 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm44491-201ENSMUST00000196794 96 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Snora3-201ENSMUST00000083082 132 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Mir32-201ENSMUST00000083610 70 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm12647-201ENSMUST00000118977 265 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm13967-201ENSMUST00000120404 380 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm16265-201ENSMUST00000134558 108 ntBASIC0.98□□□□□ -2.25
Shank3Q4ACU6 Gm16358-201ENSMUST00000146046 210 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 198 ms