Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm43505-201ENSMUST00000200579 139 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm44419-201ENSMUST00000203338 229 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm25078-201ENSMUST00000082530 107 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm25357-201ENSMUST00000082745 72 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm23412-201ENSMUST00000083017 107 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Snora3-201ENSMUST00000083082 132 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm23851-201ENSMUST00000083831 103 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm24163-201ENSMUST00000093660 132 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.23□□□□□ -2.21
Upf3aQ3ULJ3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm22935-201ENSMUST00000103960 104 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm11572-201ENSMUST00000119164 120 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm22215-201ENSMUST00000157558 96 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm24818-201ENSMUST00000175093 161 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm25284-201ENSMUST00000180345 141 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm28912-201ENSMUST00000189001 234 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm37313-201ENSMUST00000191673 290 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm36946-201ENSMUST00000192706 435 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm44063-201ENSMUST00000203307 376 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Gm26493-201ENSMUST00000083155 136 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.22□□□□□ -2.21
Upf3aQ3ULJ3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Gm24630-201ENSMUST00000122768 106 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Gm23390-201ENSMUST00000157393 106 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Gm22836-201ENSMUST00000158441 61 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Gm23024-201ENSMUST00000158770 292 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Gm22114-201ENSMUST00000177756 107 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Gm44473-201ENSMUST00000204039 152 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Gm5010-201ENSMUST00000213131 260 ntBASIC1.21□□□□□ -2.22
Upf3aQ3ULJ3 Snord71-201ENSMUST00000104361 85 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm12647-201ENSMUST00000118977 265 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm22944-201ENSMUST00000158662 133 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm23474-201ENSMUST00000158884 75 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm25450-201ENSMUST00000179144 107 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm27421-201ENSMUST00000184729 167 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm23370-201ENSMUST00000199545 130 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm42506-201ENSMUST00000202009 150 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm25930-201ENSMUST00000082785 107 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm22294-201ENSMUST00000083308 104 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Mir221-201ENSMUST00000083488 95 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm24765-201ENSMUST00000083691 103 ntBASIC1.2□□□□□ -2.22
Upf3aQ3ULJ3 Gm25506-201ENSMUST00000104339 70 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm25781-201ENSMUST00000122527 84 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm25069-201ENSMUST00000175238 86 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm37693-201ENSMUST00000194562 234 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm34139-201ENSMUST00000196166 294 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Mir376a-201ENSMUST00000197584 68 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm43884-201ENSMUST00000204251 559 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm26111-201ENSMUST00000083969 106 ntBASIC1.19□□□□□ -2.22
Upf3aQ3ULJ3 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Mir759-201ENSMUST00000103254 98 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm23705-201ENSMUST00000104370 130 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm22663-201ENSMUST00000158721 102 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm24668-201ENSMUST00000158935 104 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm27540-201ENSMUST00000184950 187 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm28418-201ENSMUST00000186179 423 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm29037-201ENSMUST00000189092 313 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm37404-201ENSMUST00000195726 359 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm22980-201ENSMUST00000082608 70 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm25135-201ENSMUST00000082648 143 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm26107-201ENSMUST00000083972 107 ntBASIC1.18□□□□□ -2.22
Upf3aQ3ULJ3 Gm15214-201ENSMUST00000122155 470 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm23208-201ENSMUST00000158666 127 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm7958-201ENSMUST00000178255 468 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm7950-201ENSMUST00000179633 468 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm29661-201ENSMUST00000186781 315 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm29308-201ENSMUST00000188863 315 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Gm45543-201ENSMUST00000209327 88 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.17□□□□□ -2.22
Upf3aQ3ULJ3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Gm24342-201ENSMUST00000103907 104 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Gm24116-201ENSMUST00000103975 107 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Gm24629-201ENSMUST00000122762 89 ntBASIC1.16□□□□□ -2.22
Upf3aQ3ULJ3 Gm23759-201ENSMUST00000158351 268 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms