Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm13711-201ENSMUST00000119708 453 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm14922-201ENSMUST00000121131 163 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm26479-201ENSMUST00000122620 106 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm23982-201ENSMUST00000157141 106 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm23718-201ENSMUST00000157350 307 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm26150-201ENSMUST00000157426 151 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm24510-201ENSMUST00000174965 94 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm22510-201ENSMUST00000179304 79 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm26336-201ENSMUST00000179449 79 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm26390-201ENSMUST00000179628 79 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm19123-201ENSMUST00000190716 651 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Mir465d-201ENSMUST00000196314 58 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Gm45456-201ENSMUST00000210841 243 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.46□□□□□ -2.18
Trafd1Q3UDK1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm22935-201ENSMUST00000103960 104 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm22027-201ENSMUST00000122737 127 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm25491-201ENSMUST00000158733 308 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm20477-201ENSMUST00000174028 280 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm38019-201ENSMUST00000195133 380 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm25357-201ENSMUST00000082745 72 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Snord118-201ENSMUST00000082965 135 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm24536-201ENSMUST00000083144 107 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm26495-201ENSMUST00000083152 137 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm24164-201ENSMUST00000093663 104 ntBASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Trafd1Q3UDK1 Gm25875-201ENSMUST00000104323 107 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm23492-201ENSMUST00000116837 115 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm14883-201ENSMUST00000120179 157 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm11388-201ENSMUST00000120908 159 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm24635-201ENSMUST00000122712 128 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm23172-201ENSMUST00000157160 124 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm23536-201ENSMUST00000157541 134 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm23854-201ENSMUST00000158378 108 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm27747-201ENSMUST00000184707 85 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm9795-201ENSMUST00000062156 693 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Mir429-201ENSMUST00000083493 83 ntBASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trafd1Q3UDK1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm25068-201ENSMUST00000103895 110 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm12512-201ENSMUST00000119620 217 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm14792-201ENSMUST00000119725 258 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm24847-201ENSMUST00000158032 108 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm24277-201ENSMUST00000158661 104 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Mir3086-201ENSMUST00000175072 87 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Mir6388-201ENSMUST00000184417 75 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm9156-201ENSMUST00000189660 463 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm45907-201ENSMUST00000213023 193 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm24966-201ENSMUST00000082443 79 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Gm10360-201ENSMUST00000097219 272 ntBASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trafd1Q3UDK1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Gm24440-201ENSMUST00000157236 63 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Gm25371-201ENSMUST00000158162 101 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Gm24512-201ENSMUST00000174963 65 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Gm5010-201ENSMUST00000213131 260 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Gm24204-201ENSMUST00000082950 107 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Gm24042-201ENSMUST00000083114 103 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.42□□□□□ -2.18
Trafd1Q3UDK1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Gm15861-201ENSMUST00000120979 339 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Gm22768-201ENSMUST00000158366 153 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Gm26022-201ENSMUST00000158663 108 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Snord87-201ENSMUST00000175437 87 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Gm27326-201ENSMUST00000183504 95 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Gm44352-201ENSMUST00000196358 110 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Gm33866-201ENSMUST00000196911 289 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.41□□□□□ -2.18
Trafd1Q3UDK1 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.4□□□□□ -2.18
Trafd1Q3UDK1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Gm26135-201ENSMUST00000101993 72 ntBASIC1.4□□□□□ -2.19
Trafd1Q3UDK1 Mir767-201ENSMUST00000103256 107 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms