Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm24314-201ENSMUST00000158274 123 ntBASIC2.22□□□□□ -2.05
Cln6Q3U466 Mir1927-201ENSMUST00000158579 109 ntBASIC2.22□□□□□ -2.05
Cln6Q3U466 Gm22510-201ENSMUST00000179304 79 ntBASIC2.22□□□□□ -2.05
Cln6Q3U466 Gm26336-201ENSMUST00000179449 79 ntBASIC2.22□□□□□ -2.05
Cln6Q3U466 Gm26390-201ENSMUST00000179628 79 ntBASIC2.22□□□□□ -2.05
Cln6Q3U466 Gm38364-201ENSMUST00000191814 179 ntBASIC2.22□□□□□ -2.05
Cln6Q3U466 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.22□□□□□ -2.05
Cln6Q3U466 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Cln6Q3U466 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Cln6Q3U466 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Cln6Q3U466 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Cln6Q3U466 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Cln6Q3U466 Mir673-201ENSMUST00000102361 91 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Gm24375-201ENSMUST00000104397 132 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Gm26411-201ENSMUST00000157668 107 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Gm25882-201ENSMUST00000157784 85 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Gm24681-201ENSMUST00000158760 107 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Cln6Q3U466 Gm37116-201ENSMUST00000195161 147 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Gm45522-201ENSMUST00000210784 166 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Snord118-201ENSMUST00000082965 135 ntBASIC2.21□□□□□ -2.06
Cln6Q3U466 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Cln6Q3U466 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cln6Q3U466 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cln6Q3U466 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Cln6Q3U466 Gm24376-201ENSMUST00000104399 127 ntBASIC2.2□□□□□ -2.06
Cln6Q3U466 DQ267100-201ENSMUST00000122600 72 ntBASIC2.2□□□□□ -2.06
Cln6Q3U466 Gm24141-201ENSMUST00000122776 115 ntBASIC2.2□□□□□ -2.06
Cln6Q3U466 Gm23249-201ENSMUST00000083369 161 ntBASIC2.2□□□□□ -2.06
Cln6Q3U466 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.2□□□□□ -2.06
Cln6Q3U466 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.2□□□□□ -2.06
Cln6Q3U466 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.2□□□□□ -2.06
Cln6Q3U466 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Cln6Q3U466 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm25323-201ENSMUST00000122555 103 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm22338-201ENSMUST00000157715 129 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm23260-201ENSMUST00000158317 172 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm23113-201ENSMUST00000158477 99 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm22775-201ENSMUST00000177630 120 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm23569-201ENSMUST00000180120 120 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Mir6926-201ENSMUST00000184562 68 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm37807-201ENSMUST00000194310 190 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm42960-201ENSMUST00000202160 241 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.19□□□□□ -2.06
Cln6Q3U466 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Cln6Q3U466 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.19□□□□□ -2.06
Cln6Q3U466 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Cln6Q3U466 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cln6Q3U466 Snord90-201ENSMUST00000104568 111 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm22105-201ENSMUST00000116734 116 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm22279-201ENSMUST00000157200 93 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm23044-201ENSMUST00000157891 100 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm25371-201ENSMUST00000158162 101 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm22946-201ENSMUST00000158558 82 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm20718-201ENSMUST00000176058 259 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm29613-201ENSMUST00000185846 313 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm37545-201ENSMUST00000186512 148 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm29544-201ENSMUST00000188860 313 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm9156-201ENSMUST00000189660 463 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm28808-201ENSMUST00000190978 313 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm44057-201ENSMUST00000204547 96 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Gm24461-201ENSMUST00000082735 103 ntBASIC2.18□□□□□ -2.06
Cln6Q3U466 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Cln6Q3U466 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Cln6Q3U466 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Cln6Q3U466 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm22023-201ENSMUST00000104354 130 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Snord100-201ENSMUST00000116836 74 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm24717-201ENSMUST00000157522 124 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm23223-201ENSMUST00000158119 127 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm24837-201ENSMUST00000158683 81 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm28358-202ENSMUST00000189292 223 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Mir3969-201ENSMUST00000197106 92 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm45492-201ENSMUST00000211611 288 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm24616-201ENSMUST00000083274 139 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm22828-201ENSMUST00000083768 107 ntBASIC2.17□□□□□ -2.06
Cln6Q3U466 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Cln6Q3U466 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Cln6Q3U466 Gm26339-201ENSMUST00000102368 99 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Cln6Q3U466 Gm24232-201ENSMUST00000104314 132 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 Gm25539-201ENSMUST00000116886 122 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 Gm24291-201ENSMUST00000157633 162 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 Gm22966-201ENSMUST00000157957 129 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Cln6Q3U466 Mir7039-201ENSMUST00000183852 85 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 Mir6975-201ENSMUST00000184879 61 ntBASIC2.16□□□□□ -2.06
Cln6Q3U466 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms