Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Snord82-201ENSMUST00000082889 70 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm25124-201ENSMUST00000083345 164 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Gm10360-201ENSMUST00000097219 272 ntBASIC2.78□□□□□ -1.96
Ddb1Q3U1J4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
Ddb1Q3U1J4 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Gm26135-201ENSMUST00000101993 72 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Gm26018-201ENSMUST00000104406 128 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Mir1967-201ENSMUST00000157789 82 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Gm17161-201ENSMUST00000169187 524 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Snord50b-201ENSMUST00000178497 72 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Gm9251-201ENSMUST00000197202 628 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Gm19118-201ENSMUST00000222554 98 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Mir340-201ENSMUST00000083483 98 ntBASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ddb1Q3U1J4 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm24475-201ENSMUST00000157435 143 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm23858-201ENSMUST00000158384 106 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm24638-201ENSMUST00000179807 132 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm27443-201ENSMUST00000184660 98 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ddb1Q3U1J4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 Gm22486-201ENSMUST00000116815 137 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 Gm24598-201ENSMUST00000122510 74 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 Gm22217-201ENSMUST00000157556 313 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 Gm24001-201ENSMUST00000158463 85 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 Gm17113-201ENSMUST00000170118 171 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 Gm44564-201ENSMUST00000207985 180 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 Gm45445-201ENSMUST00000209586 232 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.75□□□□□ -1.97
Ddb1Q3U1J4 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm23324-201ENSMUST00000157421 131 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm24106-201ENSMUST00000175498 127 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm38183-201ENSMUST00000193189 205 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Snora19-201ENSMUST00000082962 132 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm26493-201ENSMUST00000083155 136 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm23658-201ENSMUST00000083233 132 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.74□□□□□ -1.97
Ddb1Q3U1J4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm23990-201ENSMUST00000117031 117 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm24436-201ENSMUST00000157889 302 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm25460-201ENSMUST00000157954 127 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm24076-201ENSMUST00000158179 94 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm25051-201ENSMUST00000158602 249 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm25711-201ENSMUST00000158633 128 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm26435-201ENSMUST00000179026 107 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm27465-201ENSMUST00000184290 91 ntBASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ddb1Q3U1J4 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 Gm25915-201ENSMUST00000104265 126 ntBASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 Gm25424-201ENSMUST00000157612 58 ntBASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 Gm22093-201ENSMUST00000158980 111 ntBASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 Gm22248-201ENSMUST00000082482 150 ntBASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Ddb1Q3U1J4 Mir374b-201ENSMUST00000102314 95 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm24132-201ENSMUST00000104745 91 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm22151-201ENSMUST00000116963 58 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm22221-201ENSMUST00000157362 103 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm26345-201ENSMUST00000157534 120 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm23033-201ENSMUST00000157996 134 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm23714-201ENSMUST00000179259 105 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Mir6901-201ENSMUST00000185062 62 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Mir7215-201ENSMUST00000200383 51 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm44903-201ENSMUST00000206840 130 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm18213-201ENSMUST00000207850 178 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 Gm25813-201ENSMUST00000082748 191 ntBASIC2.71□□□□□ -1.98
Ddb1Q3U1J4 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.7□□□□□ -1.98
Ddb1Q3U1J4 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.7□□□□□ -1.98
Ddb1Q3U1J4 Gm26482-201ENSMUST00000158015 62 ntBASIC2.7□□□□□ -1.98
Ddb1Q3U1J4 Gm43749-201ENSMUST00000199345 352 ntBASIC2.7□□□□□ -1.98
Ddb1Q3U1J4 Gm18188-201ENSMUST00000219386 478 ntBASIC2.7□□□□□ -1.98
Ddb1Q3U1J4 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.7□□□□□ -1.98
Ddb1Q3U1J4 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.7□□□□□ -1.98
Ddb1Q3U1J4 Gm25204-201ENSMUST00000082843 106 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 174.7 ms